RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 TOM1L1O75674 476 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 DCNP07585 359 aaKnown RBP11.7□□□□□ -0.54
TRAV4-201ENST00000390426 MAPTP10636 758 aaKnown RBP11.7□□□□□ -0.54
TRAV4-201ENST00000390426 MATR3P43243 847 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAV4-201ENST00000390426 SMTNP53814 917 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 SLC12A3P55017 1021 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 ROR1Q01973 937 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 SPAG1Q07617 926 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 DHX8Q14562 1220 aaKnown RBP11.7□□□□□ -0.54
TRAV4-201ENST00000390426 NOLC1Q14978 699 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAV4-201ENST00000390426 ANGPT1Q15389 498 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 SLC10A6Q3KNW5 377 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 TMEM119Q4V9L6 283 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 PABPC1LQ4VXU2 614 aaKnown RBP11.7□□□□□ -0.54
TRAV4-201ENST00000390426 ARSHQ5FYA8 562 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 SPECC1Q5M775 1068 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 MCRS1Q96EZ8 462 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 ARHGEF3Q9NR81 526 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 SLC2A4RGQ9NR83 387 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 SMC3Q9UQE7 1217 aa11.7□□□□□ -0.54
TRAV4-201ENST00000390426 TRIP11Q15643 1979 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 WDR27A2RRH5 827 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 PRR23AA6NEV1 266 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 TBC1D4O60343 1298 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 RHOP08100 348 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 POU2F2P09086 479 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 ELF1P32519 619 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 RPL9P32969 192 aaKnown RBP11.69□□□□□ -0.54
TRAV4-201ENST00000390426 MCM4P33991 863 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 CTXN3Q4LDR2 81 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 LARP1BQ659C4 914 aaKnown RBP11.69□□□□□ -0.54
TRAV4-201ENST00000390426 ARL6IP4Q66PJ3 421 aaKnown RBP11.69□□□□□ -0.54
TRAV4-201ENST00000390426 SLC8B1Q6J4K2 584 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 PHLDB3Q6NSJ2 640 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 ZPBP2Q6X784 338 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 MTSS1LQ765P7 747 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 RTL10Q7L3V2 364 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 NPAS3Q8IXF0 933 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 KCTD17Q8N5Z5 321 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 ZNF461Q8TAF7 563 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 BICD1Q96G01 975 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 KXD1Q9BQD3 176 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 HAPLN2Q9GZV7 340 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 TUBGCP4Q9UGJ1 667 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 KCNG1Q9UIX4 513 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 FBXL5Q9UKA1 691 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 MRPS23Q9Y3D9 190 aaKnown RBP11.69□□□□□ -0.54
TRAV4-201ENST00000390426 SIT1Q9Y3P8 196 aa11.69□□□□□ -0.54
TRAV4-201ENST00000390426 PTPRZ1P23471 2315 aaPredicted RBP11.69□□□□□ -0.54
TRAV4-201ENST00000390426 H7C4K7 107 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 PRRG1O14668 218 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 SYN3O14994 580 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 CLDN3O15551 220 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 LRRN2O75325 713 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 ABLIM3O94929 683 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 SEC24AO95486 1093 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 LRG1P02750 347 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 CXCL8P10145 99 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 NCKAP1LP55160 1127 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 MCL1Q07820 350 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 SNW1Q13573 536 aaKnown RBP11.68□□□□□ -0.54
TRAV4-201ENST00000390426 MRPL58Q14197 206 aaKnown RBP11.68□□□□□ -0.54
TRAV4-201ENST00000390426 SLC5A9Q2M3M2 681 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 HAUS6Q7Z4H7 955 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 GPBP1Q86WP2 473 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 LRRC15Q8TF66 581 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 DDX12PQ92771 950 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 NKD2Q969F2 451 aaPredicted RBP11.68□□□□□ -0.54
TRAV4-201ENST00000390426 CALML4Q96GE6 196 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 SUSD3Q96L08 255 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 TBC1D32Q96NH3 1257 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 CORO1BQ9BR76 489 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 FOXQ1Q9C009 403 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 UPF2Q9HAU5 1272 aaKnown RBP11.68□□□□□ -0.54
TRAV4-201ENST00000390426 CYP4F11Q9HBI6 524 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 KCND2Q9NZV8 630 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 LARSQ9P2J5 1176 aaKnown RBP11.68□□□□□ -0.54
TRAV4-201ENST00000390426 KCNH3Q9ULD8 1083 aa11.68□□□□□ -0.54
TRAV4-201ENST00000390426 ARHGEF37A1IGU5 675 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 H0YCG3 227 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 CLTAP09496 248 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 ATF2P15336 505 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 CEBPBP17676 345 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 PTPN2P17706 415 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 MARCKSP29966 332 aaPredicted RBP11.67□□□□□ -0.54
TRAV4-201ENST00000390426 UBA7P41226 1012 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 TNFSF9P41273 254 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 MCM2P49736 904 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 GUCY2FP51841 1108 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 GRIN1Q05586 938 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 MCM6Q14566 821 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 KARSQ15046 597 aaKnown RBP11.67□□□□□ -0.54
TRAV4-201ENST00000390426 SLC44A4Q53GD3 710 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 ZBTB41Q5SVQ8 909 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 POTEHQ6S545 545 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 MYCT1Q8N699 235 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 TCEAL4Q96EI5 215 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 KIF12Q96FN5 646 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 SHDQ96IW2 340 aa11.67□□□□□ -0.54
TRAV4-201ENST00000390426 AK8Q96MA6 479 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms