RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 FOXQ1Q9C009 403 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 CNTN3Q9P232 1028 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 STK24Q9Y6E0 443 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 DNAH14Q0VDD8 3507 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 FRYLO94915 3013 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 WDR27A2RRH5 827 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 PODXLO00592 558 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 NRG2O14511 850 aaPredicted RBP12.09□□□□□ -0.47
TRAV3-201ENST00000390425 XYLBO75191 536 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 LRRN2O75325 713 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 DCNP07585 359 aaKnown RBP12.09□□□□□ -0.47
TRAV3-201ENST00000390425 HARSP12081 509 aaKnown RBP12.09□□□□□ -0.47
TRAV3-201ENST00000390425 GUCY2CP25092 1073 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 YARSP54577 528 aaKnown RBP12.09□□□□□ -0.47
TRAV3-201ENST00000390425 RAD51AP2Q09MP3 1159 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 UVSSAQ2YD98 709 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 PABPC1LQ4VXU2 614 aaKnown RBP12.09□□□□□ -0.47
TRAV3-201ENST00000390425 SEZ6Q53EL9 994 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 DTHD1Q6ZMT9 781 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 APBB1IPQ7Z5R6 666 aaPredicted RBP12.09□□□□□ -0.47
TRAV3-201ENST00000390425 TMEM161BQ8NDZ6 487 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 SPIRE2Q8WWL2 714 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 ING5Q8WYH8 240 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 KXD1Q9BQD3 176 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 HAPLN2Q9GZV7 340 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 C17orf75Q9HAS0 396 aa12.09□□□□□ -0.47
TRAV3-201ENST00000390425 TOPORSQ9NS56 1045 aaPredicted RBP12.09□□□□□ -0.47
TRAV3-201ENST00000390425 DAXXQ9UER7 740 aaPredicted RBP12.09□□□□□ -0.47
TRAV3-201ENST00000390425 NUP210Q8TEM1 1887 aaPredicted RBP12.08□□□□□ -0.48
TRAV3-201ENST00000390425 DENND4CQ5VZ89 1909 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 ARHGEF37A1IGU5 675 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 STK25O00506 426 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 SYN3O14994 580 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 ABLIM3O94929 683 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 MAPTP10636 758 aaKnown RBP12.08□□□□□ -0.48
TRAV3-201ENST00000390425 SLC12A3P55017 1021 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 STARD6P59095 220 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 MRPL58Q14197 206 aaKnown RBP12.08□□□□□ -0.48
TRAV3-201ENST00000390425 ZRSR1Q15695 479 aaKnown RBP12.08□□□□□ -0.48
TRAV3-201ENST00000390425 SLC10A6Q3KNW5 377 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 TMEM119Q4V9L6 283 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 SPECC1Q5M775 1068 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 SYT2Q8N9I0 419 aaPredicted RBP12.08□□□□□ -0.48
TRAV3-201ENST00000390425 PJA1Q8NG27 643 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 ACAP3Q96P50 834 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 PLIN2Q99541 437 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 NTPCRQ9BSD7 190 aaKnown RBP12.08□□□□□ -0.48
TRAV3-201ENST00000390425 DDX23Q9BUQ8 820 aaKnown RBP12.08□□□□□ -0.48
TRAV3-201ENST00000390425 SLC38A7Q9NVC3 462 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 ANKFY1Q9P2R3 1169 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 TUBGCP4Q9UGJ1 667 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 KCNH3Q9ULD8 1083 aa12.08□□□□□ -0.48
TRAV3-201ENST00000390425 RBM19Q9Y4C8 960 aaKnown RBP12.08□□□□□ -0.48
TRAV3-201ENST00000390425 KIF26AQ9ULI4 1882 aaPredicted RBP12.08□□□□□ -0.48
TRAV3-201ENST00000390425 NPHP3-ACAD11A0A0J9YXS1 232 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 VWA3AA6NCI4 1184 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 TRAPPC3O43617 180 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 OBSL1O75147 1896 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 TOM1L1O75674 476 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 SEC24AO95486 1093 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 RHOP08100 348 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 PLS3P13797 630 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 CEBPBP17676 345 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 RFX1P22670 979 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 CACNB1Q02641 598 aaPredicted RBP12.07□□□□□ -0.48
TRAV3-201ENST00000390425 SNW1Q13573 536 aaKnown RBP12.07□□□□□ -0.48
TRAV3-201ENST00000390425 NOLC1Q14978 699 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRAV3-201ENST00000390425 RABEP1Q15276 862 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 RILPL1Q5EBL4 403 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 PRSS36Q5K4E3 855 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 MCTP1Q6DN14 999 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 MTSS1LQ765P7 747 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 RTL10Q7L3V2 364 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 ZNF461Q8TAF7 563 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 TMX3Q96JJ7 454 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 SUSD3Q96L08 255 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 TCHPQ9BT92 498 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 TIPINQ9BVW5 301 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 PLA2G2FQ9BZM2 168 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 AVENQ9NQS1 362 aaPredicted RBP12.07□□□□□ -0.48
TRAV3-201ENST00000390425 FBXL5Q9UKA1 691 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 MRPS23Q9Y3D9 190 aaKnown RBP12.07□□□□□ -0.48
TRAV3-201ENST00000390425 SIT1Q9Y3P8 196 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 R4GN57 208 aa12.07□□□□□ -0.48
TRAV3-201ENST00000390425 SHISA7A6NL88 538 aa12.06□□□□□ -0.48
TRAV3-201ENST00000390425 FAM189A1O60320 539 aa12.06□□□□□ -0.48
TRAV3-201ENST00000390425 PLA2G4BP0C869 781 aa12.06□□□□□ -0.48
TRAV3-201ENST00000390425 CXCL8P10145 99 aa12.06□□□□□ -0.48
TRAV3-201ENST00000390425 ATF2P15336 505 aa12.06□□□□□ -0.48
TRAV3-201ENST00000390425 FCARP24071 287 aa12.06□□□□□ -0.48
TRAV3-201ENST00000390425 GJB2P29033 226 aa12.06□□□□□ -0.48
TRAV3-201ENST00000390425 RPL9P32969 192 aaKnown RBP12.06□□□□□ -0.48
TRAV3-201ENST00000390425 CCR2P41597 374 aa12.06□□□□□ -0.48
TRAV3-201ENST00000390425 NCKAP1LP55160 1127 aa12.06□□□□□ -0.48
TRAV3-201ENST00000390425 MCL1Q07820 350 aa12.06□□□□□ -0.48
TRAV3-201ENST00000390425 MLF2Q15773 248 aaPredicted RBP12.06□□□□□ -0.48
TRAV3-201ENST00000390425 ARSHQ5FYA8 562 aa12.06□□□□□ -0.48
TRAV3-201ENST00000390425 ZPBP2Q6X784 338 aa12.06□□□□□ -0.48
TRAV3-201ENST00000390425 TCEAL8Q8IYN2 117 aa12.06□□□□□ -0.48
TRAV3-201ENST00000390425 MAML2Q8IZL2 1156 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms