RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 STK24Q9Y6E0 443 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 SLITRK3O94933 977 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 ETS2P15036 469 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 VCAM1P19320 739 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 RASSF2P50749 326 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 LRRC36Q1X8D7 754 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 FRMD5Q7Z6J6 570 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 KLF6Q99612 283 aaPredicted RBP14.73□□□□□ -0.05
SDC1-202ENST00000381150 CCDC77Q9BR77 488 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 VPS37BQ9H9H4 285 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 A6NHS1 94 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 ATP9AO75110 1047 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 RAD17O75943 681 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 EYA4O95677 639 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 CBWD6Q4V339 395 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 CBWD3Q5JTY5 395 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 CBWD5Q5RIA9 395 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 MTDHQ86UE4 582 aaKnown RBP14.73□□□□□ -0.05
SDC1-202ENST00000381150 ZFP69BQ9UJL9 534 aa14.73□□□□□ -0.05
SDC1-202ENST00000381150 CAPN9O14815 690 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 FESP07332 822 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 ATF2P15336 505 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 SP100P23497 879 aaPredicted RBP14.72□□□□□ -0.05
SDC1-202ENST00000381150 PTGIRP43119 386 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 KHDC1Q4VXA5 237 aaKnown RBP14.72□□□□□ -0.05
SDC1-202ENST00000381150 MDH1BQ5I0G3 518 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 TPH2Q8IWU9 490 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 KCTD17Q8N5Z5 321 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 TEX9Q8N6V9 391 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 PPFIBP2Q8ND30 876 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 SEC14L1Q92503 715 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 CNOT7Q9UIV1 285 aaKnown RBP14.72□□□□□ -0.05
SDC1-202ENST00000381150 CHKBQ9Y259 395 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 EXOC1LA0A1B0GW35 172 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 BTNL10A8MVZ5 291 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 PDXKO00764 312 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 TBC1D12O60347 775 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 PLA2G6O60733 806 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 KRT36O76013 467 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 CALCAP01258 141 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 ATP6V1C1P21283 382 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 CDR2Q01850 454 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 ROR2Q01974 943 aaKnown RBP14.72□□□□□ -0.05
SDC1-202ENST00000381150 SNX30Q5VWJ9 437 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 CGB2Q6NT52 195 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 RINT1Q6NUQ1 792 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 ZNF365Q70YC5 407 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 SLC5A5Q92911 643 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 C12orf65Q9H3J6 166 aaKnown RBP14.72□□□□□ -0.05
SDC1-202ENST00000381150 CHST7Q9NS84 486 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 NMRK1Q9NWW6 199 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 USTQ9Y2C2 406 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 FRMD4BQ9Y2L6 1034 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 ZBTB39O15060 712 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 CETPP11597 493 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 PPP2R5CQ13362 524 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 LRRC23Q53EV4 343 aaPredicted RBP14.72□□□□□ -0.05
SDC1-202ENST00000381150 PPM1KQ8N3J5 372 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 ZSWIM1Q9BR11 485 aa14.72□□□□□ -0.05
SDC1-202ENST00000381150 GOLGA8SH3BPF8 625 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 GOLGA8MH3BSY2 632 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 TAC1P20366 129 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 MAP3K10Q02779 954 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 B3GNT9Q6UX72 402 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 HS2ST1Q7LGA3 356 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 PDCD7Q8N8D1 485 aaKnown RBP14.71□□□□□ -0.05
SDC1-202ENST00000381150 SCG3Q8WXD2 468 aaKnown RBP14.71□□□□□ -0.05
SDC1-202ENST00000381150 ZNF653Q96CK0 615 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 METTL14Q9HCE5 456 aaKnown RBP14.71□□□□□ -0.05
SDC1-202ENST00000381150 SIX2Q9NPC8 291 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 ASTN1O14525 1302 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 O00370 1275 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 GJB6O95452 261 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 CFBP00751 764 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 CNGA1P29973 690 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 PRKCIP41743 596 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 POLGP54098 1239 aaPredicted RBP14.71□□□□□ -0.05
SDC1-202ENST00000381150 CACNA2D1P54289 1103 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 DLGAP5Q15398 846 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 EPC2Q52LR7 807 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 CFAP157Q5JU67 520 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 KAZNQ674X7 775 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 C1orf186Q6ZWK4 172 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 ASRGL1Q7L266 308 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 SLC13A5Q86YT5 568 aaPredicted RBP14.71□□□□□ -0.05
SDC1-202ENST00000381150 KAT5Q92993 513 aa14.71□□□□□ -0.05
SDC1-202ENST00000381150 GLIS2Q9BZE0 524 aaPredicted RBP14.71□□□□□ -0.05
SDC1-202ENST00000381150 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.71□□□□□ -0.055e-8■■■□□ 15.1
SDC1-202ENST00000381150 SKIP12755 728 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 RXRBP28702 533 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 SSTR3P32745 418 aaPredicted RBP14.7□□□□□ -0.06
SDC1-202ENST00000381150 GCLMP48507 274 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 MYL7Q01449 175 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 CUL3Q13618 768 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 MTFR1Q15390 333 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 FKBP1CQ5VVH2 108 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 DSTYKQ6XUX3 929 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 ANKRD35Q8N283 1001 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 BORCS6Q96GS4 357 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms