RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 PCDHA3Q9Y5H8 950 aa20.78■□□□□ 0.92
FOXC1-201ENST00000380874 SRCAPQ6ZRS2 3230 aa20.78■□□□□ 0.92
FOXC1-201ENST00000380874 PRUNE1Q86TP1 453 aa20.78■□□□□ 0.92
FOXC1-201ENST00000380874 BAIAP2L1Q9UHR4 511 aa20.78■□□□□ 0.92
FOXC1-201ENST00000380874 TELO2Q9Y4R8 837 aa20.78■□□□□ 0.92
FOXC1-201ENST00000380874 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.78■□□□□ 0.92
FOXC1-201ENST00000380874 GOLGA8MH3BSY2 632 aa20.77■□□□□ 0.92
FOXC1-201ENST00000380874 PLA2G6O60733 806 aa20.77■□□□□ 0.92
FOXC1-201ENST00000380874 NCKAP1LP55160 1127 aa20.77■□□□□ 0.92
FOXC1-201ENST00000380874 QPCTQ16769 361 aa20.77■□□□□ 0.92
FOXC1-201ENST00000380874 GPRASP2Q96D09 838 aa20.77■□□□□ 0.92
FOXC1-201ENST00000380874 GMLQ99445 158 aa20.77■□□□□ 0.92
FOXC1-201ENST00000380874 NOCTQ9UK39 431 aaKnown RBP20.77■□□□□ 0.92
FOXC1-201ENST00000380874 PPFIA2O75334 1257 aa20.77■□□□□ 0.92
FOXC1-201ENST00000380874 KRT10P13645 584 aa20.77■□□□□ 0.92
FOXC1-201ENST00000380874 LACTBP83111 547 aaPredicted RBP20.77■□□□□ 0.92
FOXC1-201ENST00000380874 ENOSF1Q7L5Y1 443 aa20.77■□□□□ 0.92
FOXC1-201ENST00000380874 HELQQ8TDG4 1101 aa20.77■□□□□ 0.92
FOXC1-201ENST00000380874 CDC42EP4Q9H3Q1 356 aaKnown RBP20.77■□□□□ 0.92
FOXC1-201ENST00000380874 EXTL3O43909 919 aa20.77■□□□□ 0.92
FOXC1-201ENST00000380874 NOP14P78316 857 aaKnown RBP20.77■□□□□ 0.92
FOXC1-201ENST00000380874 IRX3P78415 501 aaPredicted RBP20.77■□□□□ 0.92
FOXC1-201ENST00000380874 TMC2Q8TDI7 906 aa20.77■□□□□ 0.92
FOXC1-201ENST00000380874 SNF8Q96H20 258 aa20.77■□□□□ 0.92
FOXC1-201ENST00000380874 SGK1O00141 431 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 C1orf220Q5T0J3 134 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 IZUMO3Q5VZ72 239 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 RHOT1Q8IXI2 618 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 MCOLN2Q8IZK6 566 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 ZWILCHQ9H900 591 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 KIAA1586Q9HCI6 787 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 ATP2A1O14983 1001 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 CLTAP09496 248 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 SNRPFP62306 86 aaKnown RBP20.76■□□□□ 0.91
FOXC1-201ENST00000380874 CNTN2Q02246 1040 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 NCOA4Q13772 614 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 GPC3P51654 580 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 LRRC34Q8IZ02 419 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 TCP11Q8WWU5 503 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 OSBPL8Q9BZF1 889 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 SAYSD1Q9NPB0 183 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 CDK5RAP2Q96SN8 1893 aa20.76■□□□□ 0.91
FOXC1-201ENST00000380874 BRAFP15056 766 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 SLFN12LQ6IEE8 588 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 HVCN1Q96D96 273 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 LRRC4CQ9HCJ2 640 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 TAF1LQ8IZX4 1826 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 TRAPPC3O43617 180 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 WEE2P0C1S8 567 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 SCYL3Q8IZE3 742 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 LRRC71Q8N4P6 559 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 FAM81BQ96LP2 452 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 A1CFQ9NQ94 594 aaKnown RBP20.75■□□□□ 0.91
FOXC1-201ENST00000380874 KCNG1Q9UIX4 513 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 TEX2Q8IWB9 1127 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 ZBTB8OSQ8IWT0 167 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 C12orf56Q8IXR9 622 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 ATL2Q8NHH9 583 aa20.75■□□□□ 0.91
FOXC1-201ENST00000380874 FOXO6A8MYZ6 492 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 HIBCHQ6NVY1 386 aaPredicted RBP20.74■□□□□ 0.91
FOXC1-201ENST00000380874 FAM47EQ6ZV65 393 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 CCDC89Q8N998 374 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 H0YGN5 161 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 RIPK2O43353 540 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 AGTP01019 485 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 RARGP13631 454 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 HNRNPH1P31943 449 aaKnown RBP20.74■□□□□ 0.91
FOXC1-201ENST00000380874 MAN1A1P33908 653 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 CUL2Q13617 745 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.74■□□□□ 0.91
FOXC1-201ENST00000380874 HOXC10Q9NYD6 342 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 NFS1Q9Y697 457 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 LYPLA2O95372 231 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 CYP1A2P05177 515 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 FNTAP49354 379 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 ICE2Q659A1 982 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 HAUS2Q9NVX0 235 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 ADGRA3Q8IWK6 1321 aa20.74■□□□□ 0.91
FOXC1-201ENST00000380874 GARTP22102 1010 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 BRD2P25440 801 aaKnown RBP20.73■□□□□ 0.91
FOXC1-201ENST00000380874 GTF2H1P32780 548 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 ACTN3Q08043 901 aaPredicted RBP20.73■□□□□ 0.91
FOXC1-201ENST00000380874 MCEEQ96PE7 176 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 CTNNAL1Q9UBT7 734 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 SLX4Q8IY92 1834 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 EXOC1LA0A1B0GW35 172 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 TCP11X1B4DZS4 312 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 E2F5Q15329 346 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 ATP13A4Q4VNC1 1196 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 RNF149Q8NC42 400 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 SPIRE2Q8WWL2 714 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 STK38LQ9Y2H1 464 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 ZBTB41Q5SVQ8 909 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 ERICH1Q86X53 443 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 JPH2Q9BR39 696 aaPredicted RBP20.73■□□□□ 0.91
FOXC1-201ENST00000380874 C17orf75Q9HAS0 396 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 UBR3Q6ZT12 1888 aa20.73■□□□□ 0.91
FOXC1-201ENST00000380874 TMEM120BA0PK00 339 aa20.72■□□□□ 0.91
FOXC1-201ENST00000380874 STAM2O75886 525 aa20.72■□□□□ 0.91
FOXC1-201ENST00000380874 LDHAP00338 332 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms