RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 SLC8B1Q6J4K2 584 aa18.45■□□□□ 0.54
SMN2-201ENST00000380741 PHLDB3Q6NSJ2 640 aa18.45■□□□□ 0.54
SMN2-201ENST00000380741 MTSS1LQ765P7 747 aa18.45■□□□□ 0.54
SMN2-201ENST00000380741 RTL10Q7L3V2 364 aa18.45■□□□□ 0.54
SMN2-201ENST00000380741 SYT2Q8N9I0 419 aaPredicted RBP18.45■□□□□ 0.54
SMN2-201ENST00000380741 TMEM161BQ8NDZ6 487 aa18.45■□□□□ 0.54
SMN2-201ENST00000380741 SPIRE2Q8WWL2 714 aa18.45■□□□□ 0.54
SMN2-201ENST00000380741 NKD2Q969F2 451 aaPredicted RBP18.45■□□□□ 0.54
SMN2-201ENST00000380741 C18orf25Q96B23 403 aaPredicted RBP18.45■□□□□ 0.54
SMN2-201ENST00000380741 TMX3Q96JJ7 454 aa18.45■□□□□ 0.54
SMN2-201ENST00000380741 ANKFY1Q9P2R3 1169 aa18.45■□□□□ 0.54
SMN2-201ENST00000380741 MIA3Q5JRA6 1907 aa18.45■□□□□ 0.54
SMN2-201ENST00000380741 COL4A3Q01955 1670 aa18.44■□□□□ 0.54
SMN2-201ENST00000380741 WDR27A2RRH5 827 aa18.44■□□□□ 0.54
SMN2-201ENST00000380741 TOM1L1O75674 476 aa18.44■□□□□ 0.54
SMN2-201ENST00000380741 CD2BP2O95400 341 aaKnown RBP18.44■□□□□ 0.54
SMN2-201ENST00000380741 MAPTP10636 758 aaKnown RBP18.44■□□□□ 0.54
SMN2-201ENST00000380741 GJB2P29033 226 aa18.44■□□□□ 0.54
SMN2-201ENST00000380741 SLC12A3P55017 1021 aa18.44■□□□□ 0.54
SMN2-201ENST00000380741 GPC5P78333 572 aa18.44■□□□□ 0.54
SMN2-201ENST00000380741 STRN3Q13033 797 aa18.44■□□□□ 0.54
SMN2-201ENST00000380741 NOLC1Q14978 699 aaKnown RBP eCLIP18.44■□□□□ 0.54
SMN2-201ENST00000380741 SEZ6Q53EL9 994 aa18.44■□□□□ 0.54
SMN2-201ENST00000380741 SPECC1Q5M775 1068 aa18.44■□□□□ 0.54
SMN2-201ENST00000380741 NPAS3Q8IXF0 933 aa18.44■□□□□ 0.54
SMN2-201ENST00000380741 ZNF461Q8TAF7 563 aa18.44■□□□□ 0.54
SMN2-201ENST00000380741 KCNH3Q9ULD8 1083 aa18.44■□□□□ 0.54
SMN2-201ENST00000380741 H3BQV1 296 aa18.43■□□□□ 0.54
SMN2-201ENST00000380741 SYN3O14994 580 aa18.43■□□□□ 0.54
SMN2-201ENST00000380741 ABLIM3O94929 683 aa18.43■□□□□ 0.54
SMN2-201ENST00000380741 DCNP07585 359 aaKnown RBP18.43■□□□□ 0.54
SMN2-201ENST00000380741 PLA2G4BP0C869 781 aa18.43■□□□□ 0.54
SMN2-201ENST00000380741 RPL9P32969 192 aaKnown RBP18.43■□□□□ 0.54
SMN2-201ENST00000380741 SMTNP53814 917 aa18.43■□□□□ 0.54
SMN2-201ENST00000380741 SLC10A6Q3KNW5 377 aa18.43■□□□□ 0.54
SMN2-201ENST00000380741 ING5Q8WYH8 240 aa18.43■□□□□ 0.54
SMN2-201ENST00000380741 CDK5RAP3Q96JB5 506 aa18.43■□□□□ 0.54
SMN2-201ENST00000380741 FOXQ1Q9C009 403 aa18.43■□□□□ 0.54
SMN2-201ENST00000380741 SIT1Q9Y3P8 196 aa18.43■□□□□ 0.54
SMN2-201ENST00000380741 NUB1Q9Y5A7 615 aa18.43■□□□□ 0.54
SMN2-201ENST00000380741 GVINP1Q7Z2Y8 2422 aa18.43■□□□□ 0.54
SMN2-201ENST00000380741 NPHP3-ACAD11A0A0J9YXS1 232 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 ARHGEF37A1IGU5 675 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 TBC1D4O60343 1298 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 RHOP08100 348 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 ARPP19P56211 112 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 CACNB1Q02641 598 aaPredicted RBP18.42■□□□□ 0.54
SMN2-201ENST00000380741 SLC5A9Q2M3M2 681 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 TMEM119Q4V9L6 283 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 ARL6IP4Q66PJ3 421 aaKnown RBP18.42■□□□□ 0.54
SMN2-201ENST00000380741 ZPBP2Q6X784 338 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 KCTD17Q8N5Z5 321 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 KXD1Q9BQD3 176 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 KCND2Q9NZV8 630 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 DLGAP2Q9P1A6 1054 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 TUBGCP4Q9UGJ1 667 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 KCNG1Q9UIX4 513 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 MRPS23Q9Y3D9 190 aaKnown RBP18.42■□□□□ 0.54
SMN2-201ENST00000380741 DCHS1Q96JQ0 3298 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 CACNA1IQ9P0X4 2223 aa18.42■□□□□ 0.54
SMN2-201ENST00000380741 PRRG1O14668 218 aa18.41■□□□□ 0.54
SMN2-201ENST00000380741 CLDN3O15551 220 aa18.41■□□□□ 0.54
SMN2-201ENST00000380741 LRG1P02750 347 aa18.41■□□□□ 0.54
SMN2-201ENST00000380741 ATF2P15336 505 aa18.41■□□□□ 0.54
SMN2-201ENST00000380741 ELF1P32519 619 aa18.41■□□□□ 0.54
SMN2-201ENST00000380741 MCM4P33991 863 aa18.41■□□□□ 0.54
SMN2-201ENST00000380741 STARD6P59095 220 aa18.41■□□□□ 0.54
SMN2-201ENST00000380741 MCL1Q07820 350 aa18.41■□□□□ 0.54
SMN2-201ENST00000380741 SNW1Q13573 536 aaKnown RBP18.41■□□□□ 0.54
SMN2-201ENST00000380741 MRPL58Q14197 206 aaKnown RBP18.41■□□□□ 0.54
SMN2-201ENST00000380741 TMEM130Q8N3G9 435 aa18.41■□□□□ 0.54
SMN2-201ENST00000380741 PJA1Q8NG27 643 aa18.41■□□□□ 0.54
SMN2-201ENST00000380741 HAPLN2Q9GZV7 340 aa18.41■□□□□ 0.54
SMN2-201ENST00000380741 FBXL5Q9UKA1 691 aa18.41■□□□□ 0.54
SMN2-201ENST00000380741 FRYLO94915 3013 aa18.41■□□□□ 0.54
SMN2-201ENST00000380741 H7C4K7 107 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 CXCL8P10145 99 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 GLULP15104 373 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 NCKAP1LP55160 1127 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 CTXN3Q4LDR2 81 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 ARSHQ5FYA8 562 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 POTEHQ6S545 545 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 TCEAL8Q8IYN2 117 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 MCRS1Q96EZ8 462 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 SHDQ96IW2 340 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 SUSD3Q96L08 255 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 TBC1D32Q96NH3 1257 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 CYP4F11Q9HBI6 524 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 AVENQ9NQS1 362 aaPredicted RBP18.4■□□□□ 0.54
SMN2-201ENST00000380741 FANCMQ8IYD8 2048 aa18.4■□□□□ 0.54
SMN2-201ENST00000380741 ZNF292O60281 2723 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 LRRN2O75325 713 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 SEC24AO95486 1093 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 CEBPBP17676 345 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 PTPN2P17706 415 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 MATR3P43243 847 aaKnown RBP eCLIP18.39■□□□□ 0.53
SMN2-201ENST00000380741 SPAG1Q07617 926 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 MLF2Q15773 248 aaPredicted RBP18.39■□□□□ 0.53
SMN2-201ENST00000380741 ZNF280DQ6N043 979 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 LRRC15Q8TF66 581 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms