RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 CEP72Q9P209 647 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 KIAA1217Q5T5P2 1943 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 MYOCOSA0A1B0GUC4 107 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 H0YHG0 523 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 SERPING1P05155 500 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 MKRN3Q13064 507 aaKnown RBP7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 SPA17Q15506 151 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 TREML2Q5T2D2 321 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 SFMBT2Q5VUG0 894 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 RPAINQ86UA6 219 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 RIPK2O43353 540 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 FAM163BP0C2L3 166 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 CALCRLQ16602 461 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 KYNUQ16719 465 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 PPP4R3AQ6IN85 833 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 RHBDF2Q6PJF5 856 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 SPATC1LQ9H0A9 340 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 CRISPLD2Q9H0B8 497 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 GLT8D2Q9H1C3 349 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 CPA4Q9UI42 421 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 HAO1Q9UJM8 370 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 ADCY3O60266 1144 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 PDHA1P08559 390 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 SNHG28P0DPA3 235 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 EPHB2P29323 1055 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 TRAPPC10P48553 1259 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 BNIP1Q12981 228 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 IFT20Q8IY31 132 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 U2AF1L4Q8WU68 220 aaKnown RBP7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 CHMP6Q96FZ7 201 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.88□□□□□ -1.154e-8■■■□□ 16.3
GPCPD1-201ENST00000379019 GBP3Q9H0R5 595 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 Q9Y3F1 56 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 WASF2Q9Y6W5 498 aa7.88□□□□□ -1.15
GPCPD1-201ENST00000379019 ABCB11O95342 1321 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 FRMPD4Q14CM0 1322 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 STAT2P52630 851 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 MLLT1Q03111 559 aaPredicted RBP7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 CKAP4Q07065 602 aaKnown RBP7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 SPAG1Q07617 926 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 TBC1D25Q3MII6 688 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 MAP3K21Q5TCX8 1036 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 SLFN13Q68D06 897 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 FAM136AQ96C01 138 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 KIFC3Q9BVG8 833 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 ARHGEF3Q9NR81 526 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 RBPJLQ9UBG7 517 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 TRPC6Q9Y210 931 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 NEU2Q9Y3R4 380 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 A0A1W2PRG0 241 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 SPAG7O75391 227 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 CNMDO75829 334 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 IGHA2P01877 340 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 DLATP10515 647 aaKnown RBP7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 GHRHRQ02643 423 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 PRPF4BQ13523 1007 aaKnown RBP7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 SLC1A5Q15758 541 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 SNCBQ16143 134 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 PPP1R15BQ5SWA1 713 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 CAPN12Q6ZSI9 719 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 GPR142Q7Z601 462 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 MCF2L2Q86YR7 1114 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 MICAL1Q8TDZ2 1067 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 SLC5A5Q92911 643 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 CLPTM1LQ96KA5 538 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 KREMEN1Q96MU8 473 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 CDC42EP4Q9H3Q1 356 aaKnown RBP7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 ZHX3Q9H4I2 956 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 ALG13Q9NP73 1137 aaKnown RBP7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 GJD2Q9UKL4 321 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 ALG6Q9Y672 507 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 ASB14A6NK59 587 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 SGPL1O95470 568 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 RRM1P23921 792 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 PDIA5Q14554 519 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 MSS51Q4VC12 460 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 COBLL1Q53SF7 1204 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 TRPM8Q7Z2W7 1104 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 CPNE9Q8IYJ1 553 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 DENND2DQ9H6A0 471 aaPredicted RBP7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 TMEM120BA0PK00 339 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 F5H6K3 240 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 GCOM1H8Y6P7 765 aaPredicted RBP7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 MYZAPP0CAP1 466 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 PRPHP41219 470 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 FXR2P51116 673 aaKnown RBP eCLIP7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 PTENP60484 403 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 TUBB2AQ13885 445 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 NEDD9Q14511 834 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 HERC4Q5GLZ8 1057 aaPredicted RBP7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 CACNA2D4Q7Z3S7 1137 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 C9orf72Q96LT7 481 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 TSEN34Q9BSV6 310 aaKnown RBP7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 TUBB2BQ9BVA1 445 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 MYLK2Q9H1R3 596 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 PLAC1Q9HBJ0 212 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 SLC38A10Q9HBR0 1119 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 PTPRJQ12913 1337 aa7.87□□□□□ -1.15
GPCPD1-201ENST00000379019 A0A1W2PPC1 479 aa7.86□□□□□ -1.15
GPCPD1-201ENST00000379019 FLOT1O75955 427 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms