RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 GOLGA8RI6L899 631 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 PPP1R37O75864 691 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 VIL1P09327 827 aaKnown RBP13.96□□□□□ -0.17
NPHP4-203ENST00000378169 SUPT20HL2P0C7V6 817 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 CYP11B1P15538 503 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 GUCY2CP25092 1073 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 SLC1A1P43005 524 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 SPARCL1Q14515 664 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 LONRF1Q17RB8 773 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 RDM1Q8NG50 284 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 ERP44Q9BS26 406 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 MTFR1LQ9H019 292 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 DBR1Q9UK59 544 aaKnown RBP13.96□□□□□ -0.17
NPHP4-203ENST00000378169 IQANK1A0A1B0GTG1 560 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 LRRIQ3A6PVS8 624 aaPredicted RBP13.96□□□□□ -0.17
NPHP4-203ENST00000378169 HBP1O60381 514 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 SLC12A3P55017 1021 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 EIF3EP60228 445 aaKnown RBP13.96□□□□□ -0.17
NPHP4-203ENST00000378169 RBP5P82980 135 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 CDK17Q00537 523 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 TSNAXIP1Q2TAA8 658 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 P3H1Q32P28 736 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 GPRC5AQ8NFJ5 357 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 RBM15Q96T37 977 aaKnown RBP eCLIP13.96□□□□□ -0.178e-10■■■■■ 32.2
NPHP4-203ENST00000378169 VIPAS39Q9H9C1 493 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 TLK1Q9UKI8 766 aa13.96□□□□□ -0.17
NPHP4-203ENST00000378169 MOCS2O96007 188 aaPredicted RBP13.96□□□□□ -0.18
NPHP4-203ENST00000378169 RALAP11233 206 aa13.96□□□□□ -0.18
NPHP4-203ENST00000378169 HEATR6Q6AI08 1181 aaKnown RBP13.96□□□□□ -0.18
NPHP4-203ENST00000378169 ZNF507Q8TCN5 953 aa13.96□□□□□ -0.18
NPHP4-203ENST00000378169 DNAJC19Q96DA6 116 aa13.96□□□□□ -0.18
NPHP4-203ENST00000378169 CALR3Q96L12 384 aaKnown RBP13.96□□□□□ -0.18
NPHP4-203ENST00000378169 DCTN4Q9UJW0 460 aa13.96□□□□□ -0.18
NPHP4-203ENST00000378169 MED1Q15648 1581 aaPredicted RBP13.96□□□□□ -0.18
NPHP4-203ENST00000378169 RRM1P23921 792 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 TGFB2P61812 414 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 CAV1Q03135 178 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 NLRP14Q86W24 1093 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 HDAC7Q8WUI4 952 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 RAB3IPQ96QF0 476 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-203ENST00000378169 STAP1Q9ULZ2 295 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 MAP3K6O95382 1288 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 ITGB3P05106 788 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 SEC24CP53992 1094 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 TATDN2Q93075 761 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 ALG13Q9NP73 1137 aaKnown RBP13.95□□□□□ -0.18
NPHP4-203ENST00000378169 KCNMB3Q9NPA1 279 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 HAUS2Q9NVX0 235 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 GGT7Q9UJ14 662 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 CPSF3Q9UKF6 684 aaKnown RBP13.95□□□□□ -0.18
NPHP4-203ENST00000378169 RNF225M0QZC1 329 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-203ENST00000378169 COPEO14579 308 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 TMPRSS15P98073 1019 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 ASPHQ12797 758 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 CUL2Q13617 745 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 LMNTD2Q8IXW0 634 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 MICAL1Q8TDZ2 1067 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 CYFIP2Q96F07 1278 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 MAGEB2O15479 319 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 GPC4O75487 556 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 GMNNO75496 209 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 APRTP07741 180 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 RPSAP08865 295 aaKnown RBP13.95□□□□□ -0.18
NPHP4-203ENST00000378169 CDR2Q01850 454 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 ROR1Q01973 937 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 BZW1Q7L1Q6 419 aaKnown RBP13.95□□□□□ -0.18
NPHP4-203ENST00000378169 HNRNPLLQ8WVV9 542 aaKnown RBP13.95□□□□□ -0.18
NPHP4-203ENST00000378169 SLC13A1Q9BZW2 595 aa13.95□□□□□ -0.18
NPHP4-203ENST00000378169 CACNA1FO60840 1977 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 CST8O60676 142 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 SRGAP2BP0DMP2 458 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 CYP2C9P11712 490 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 AP1B1Q10567 949 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 SLC29A2Q14542 456 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 ECM1Q16610 540 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 HIF1AQ16665 826 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 AMHR2Q16671 573 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 CBWD6Q4V339 395 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 CBWD3Q5JTY5 395 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 CBWD5Q5RIA9 395 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 ERO1BQ86YB8 467 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 C4orf32Q8N8J7 132 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 CASKIN2Q8WXE0 1202 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 SLC5A5Q92911 643 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 ANKZF1Q9H8Y5 726 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 ACP6Q9NPH0 428 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 PRMT7Q9NVM4 692 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-203ENST00000378169 OGTO15294 1046 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 BNIP3LO60238 219 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 PPP1R11O60927 126 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-203ENST00000378169 SNCBQ16143 134 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 LRRC55Q6ZSA7 311 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 HVCN1Q96D96 273 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 WDR18Q9BV38 432 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 TLR10Q9BXR5 811 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 IKZF4Q9H2S9 585 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 A1CFQ9NQ94 594 aaKnown RBP13.94□□□□□ -0.18
NPHP4-203ENST00000378169 DDX56Q9NY93 547 aaKnown RBP13.94□□□□□ -0.18
NPHP4-203ENST00000378169 SLC12A6Q9UHW9 1150 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 GLI1P08151 1106 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms