RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 FAM153BP0C7A2 387 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 CAPSQ13938 189 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 EML3Q32P44 896 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 EDRF1Q3B7T1 1238 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 FAM153CQ494X1 144 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 RFX6Q8HWS3 928 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 TMEM161BQ8NDZ6 487 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 CCDC26Q8TAB7 109 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 BAP1Q92560 729 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 ATXN7L3BQ96GX2 97 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 ZNF446Q9NWS9 450 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 HESX1Q9UBX0 185 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 FAM153AQ9UHL3 310 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 ODF2LQ9ULJ1 636 aa8.65□□□□□ -1.03
CKAP2-203ENST00000378037 CACNA1SQ13698 1873 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 GRID2IPA4D2P6 1211 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 GOLGA8RI6L899 631 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 CREB3O43889 395 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 KRT81Q14533 505 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 DUOXA2Q1HG44 320 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 ST13P5Q8NFI4 369 aaPredicted RBP8.64□□□□□ -1.03
CKAP2-203ENST00000378037 FAM76AQ8TAV0 307 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 GDAP1Q8TB36 358 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 KLF6Q99612 283 aaPredicted RBP8.64□□□□□ -1.03
CKAP2-203ENST00000378037 SPC25Q9HBM1 224 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 XPNPEP1Q9NQW7 623 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 NR2E1Q9Y466 385 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 DAAM1Q9Y4D1 1078 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 UBIAD1Q9Y5Z9 338 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 KIF4AO95239 1232 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 GHRP10912 638 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 ADSSP30520 456 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 NRLP54845 237 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 GPC5P78333 572 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 TFDP1Q14186 410 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 CCDC142Q17RM4 750 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 BTNL9Q6UXG8 535 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 CTU1Q7Z7A3 348 aaKnown RBP8.64□□□□□ -1.03
CKAP2-203ENST00000378037 PARD3BQ8TEW8 1205 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 ZFP42Q96MM3 310 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 ZIC5Q96T25 663 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 TLR10Q9BXR5 811 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 NACA2Q9H009 215 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 STIM2Q9P246 746 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 NR2E3Q9Y5X4 410 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 LAMA4Q16363 1823 aa8.64□□□□□ -1.03
CKAP2-203ENST00000378037 E7EVH7 732 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 O00370 1275 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 NDUFAB1O14561 156 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 HMBSP08397 361 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 CYP11B1P15538 503 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 KRT15P19012 456 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 GNGT1P63211 74 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 ANKMY2Q8IV38 441 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 CCDC89Q8N998 374 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 STK33Q9BYT3 514 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 NUCKS1Q9H1E3 243 aaKnown RBP8.63□□□□□ -1.03
CKAP2-203ENST00000378037 MINDY3Q9H8M7 445 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 PRDM5Q9NQX1 630 aaPredicted RBP8.63□□□□□ -1.03
CKAP2-203ENST00000378037 ERAP1Q9NZ08 941 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 TJP2Q9UDY2 1190 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 TSR3Q9UJK0 312 aaKnown RBP8.63□□□□□ -1.03
CKAP2-203ENST00000378037 NOVA2Q9UNW9 492 aaKnown RBP8.63□□□□□ -1.03
CKAP2-203ENST00000378037 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.63□□□□□ -1.03
CKAP2-203ENST00000378037 PTPRZ1P23471 2315 aaPredicted RBP8.63□□□□□ -1.03
CKAP2-203ENST00000378037 NFICP08651 508 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 KCNA2P16389 499 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 THPOP40225 353 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 WNT7BP56706 349 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 DR1Q01658 176 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 SEMA3FQ13275 785 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 TAF12Q16514 161 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 BBS9Q3SYG4 887 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 LBX2Q6XYB7 198 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 RSRC2Q7L4I2 434 aaKnown RBP8.63□□□□□ -1.03
CKAP2-203ENST00000378037 PLEKHO2Q8TD55 490 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 AGAP3Q96P47 875 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 PGLYRP2Q96PD5 576 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 UNC80Q8N2C7 3258 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 WDR87Q6ZQQ6 2873 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 ASCC3Q8N3C0 2202 aaKnown RBP8.63□□□□□ -1.03
CKAP2-203ENST00000378037 LRRC10BA6NIK2 292 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 VGLL3A8MV65 326 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 DHX15O43143 795 aaKnown RBP8.63□□□□□ -1.03
CKAP2-203ENST00000378037 RPL7AP62424 266 aaKnown RBP8.63□□□□□ -1.03
CKAP2-203ENST00000378037 PAK2Q13177 524 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 METTL7BQ6UX53 244 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 DSTYKQ6XUX3 929 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 TRAPPC11Q7Z392 1133 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 C4orf19Q8IY42 314 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 DCLK2Q8N568 766 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 LNX1Q8TBB1 728 aaPredicted RBP8.63□□□□□ -1.03
CKAP2-203ENST00000378037 AFAP1L1Q8TED9 768 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 IPO4Q8TEX9 1081 aaKnown RBP8.63□□□□□ -1.03
CKAP2-203ENST00000378037 GPRASP2Q96D09 838 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 UBE4BO95155 1302 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 FRMPD4Q14CM0 1322 aa8.63□□□□□ -1.03
CKAP2-203ENST00000378037 TCRBV7S2A1N4TA0A589 114 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 RNF8O76064 485 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 FARP2O94887 1054 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms