RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 LRCH1Q9Y2L9 728 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 GOLGA8RI6L899 631 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 TBX10O75333 385 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 BMP3P12645 472 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 PLS3P13797 630 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 GAP43P17677 238 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 MAPK4P31152 587 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 PIK3CAP42336 1068 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 UBXN2AP68543 259 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 P3H1Q32P28 736 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 CLNKQ7Z7G1 428 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 EZH1Q92800 747 aaPredicted RBP16.85■□□□□ 0.29
CKAP4-201ENST00000378026 GORASP1Q9BQQ3 440 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 PLVAPQ9BX97 442 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 ARL8BQ9NVJ2 186 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 NAV1Q8NEY1 1877 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 GOLGA8IPA6NC78 632 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 GOLGA8JA6NMD2 632 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 GYG2O15488 501 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 RALAP11233 206 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 CETN1Q12798 172 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 ZFYVE27Q5T4F4 411 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 LRRC74BQ6ZQY2 392 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 ATL2Q8NHH9 583 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 WDR60Q8WVS4 1066 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 GBP5Q96PP8 586 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 MKNK1Q9BUB5 465 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 C2orf71A6NGG8 1288 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 ZSCAN5DPP0CG00 497 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 CPA2P48052 419 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 ZBTB16Q05516 673 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 SEPT7Q16181 437 aaKnown RBP16.84■□□□□ 0.29
CKAP4-201ENST00000378026 PDK4Q16654 411 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 PCNX4Q63HM2 1172 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 ZNF75CPQ92670 426 aaPredicted RBP16.84■□□□□ 0.29
CKAP4-201ENST00000378026 STMN2Q93045 179 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.84■□□□□ 0.292e-8■■□□□ 12
CKAP4-201ENST00000378026 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.84■□□□□ 0.29
CKAP4-201ENST00000378026 ARFGEF1Q9Y6D6 1849 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 CYP3A7-CYP3A51PA0A087WV96 503 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 ABLIM1O14639 778 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 EIF3DO15371 548 aaKnown RBP eCLIP16.84■□□□□ 0.29
CKAP4-201ENST00000378026 CYP3A7P24462 503 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 GCAP28676 217 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 NOVP48745 357 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 FMO1Q01740 532 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 RASA3Q14644 834 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 MAPK6Q16659 721 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
CKAP4-201ENST00000378026 RASIP1Q5U651 963 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 DENND1AQ8TEH3 1009 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 FBXO6Q9NRD1 293 aaPredicted RBP16.84■□□□□ 0.29
CKAP4-201ENST00000378026 KLHL11Q9NVR0 708 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 HEY2Q9UBP5 337 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 WASF2Q9Y6W5 498 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 ROBO1Q9Y6N7 1651 aa16.84■□□□□ 0.29
CKAP4-201ENST00000378026 BANF1O75531 89 aa16.83■□□□□ 0.29
CKAP4-201ENST00000378026 TCEA3O75764 348 aa16.83■□□□□ 0.29
CKAP4-201ENST00000378026 CETN2P41208 172 aa16.83■□□□□ 0.29
CKAP4-201ENST00000378026 CUL3Q13618 768 aa16.83■□□□□ 0.29
CKAP4-201ENST00000378026 SLC10A5Q5PT55 438 aa16.83■□□□□ 0.29
CKAP4-201ENST00000378026 FYB2Q5VWT5 728 aa16.83■□□□□ 0.29
CKAP4-201ENST00000378026 C1orf186Q6ZWK4 172 aa16.83■□□□□ 0.29
CKAP4-201ENST00000378026 DHX38Q92620 1227 aaKnown RBP16.83■□□□□ 0.29
CKAP4-201ENST00000378026 SH2D3AQ9BRG2 576 aa16.83■□□□□ 0.29
CKAP4-201ENST00000378026 USTQ9Y2C2 406 aa16.83■□□□□ 0.29
CKAP4-201ENST00000378026 IRS2Q9Y4H2 1338 aa16.83■□□□□ 0.29
CKAP4-201ENST00000378026 SIGLEC16A6NMB1 481 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 GOLGA8SH3BPF8 625 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 GOLGA8MH3BSY2 632 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 ZBED4O75132 1171 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 LMNAP02545 664 aaKnown RBP16.83■□□□□ 0.28
CKAP4-201ENST00000378026 VAMP7P51809 220 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 PDCD2Q16342 344 aaPredicted RBP16.83■□□□□ 0.28
CKAP4-201ENST00000378026 SLC5A9Q2M3M2 681 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 KAZNQ674X7 775 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 GLIS1Q8NBF1 620 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 PPFIBP2Q8ND30 876 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 MORC4Q8TE76 937 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 GRK7Q8WTQ7 553 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 CBWD1Q9BRT8 395 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 CD209Q9NNX6 404 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 DDX4Q9NQI0 724 aaKnown RBP16.83■□□□□ 0.28
CKAP4-201ENST00000378026 NOCTQ9UK39 431 aaKnown RBP16.83■□□□□ 0.28
CKAP4-201ENST00000378026 VAV3Q9UKW4 847 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 SORBS3O60504 671 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 ETS1P14921 441 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 KRT4P19013 534 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 ADRA1DP25100 572 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 TM4SF1P30408 202 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 TAB3Q8N5C8 712 aaPredicted RBP16.83■□□□□ 0.28
CKAP4-201ENST00000378026 LINC00116Q8NCU8 138 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 CCDC127Q96BQ5 260 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 KREMEN1Q96MU8 473 aa16.83■□□□□ 0.28
CKAP4-201ENST00000378026 MAGEB2O15479 319 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 GSC2O15499 205 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 SLITRK3O94933 977 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 NEK3P51956 506 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 NOP14P78316 857 aaKnown RBP16.82■□□□□ 0.28
CKAP4-201ENST00000378026 THOC5Q13769 683 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms