RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ANKMY2Q8IV38 441 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 TTC39CQ8N584 583 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 ATP8B4Q8TF62 1192 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 BAP1Q92560 729 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 INPP5DQ92835 1189 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 TMEM117Q9H0C3 514 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 SLC9A2Q9UBY0 812 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 RGPD1P0DJD0 1748 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 SORBS3O60504 671 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 ZFXP17010 805 aaPredicted RBP9.25□□□□□ -0.93
PCDH9-202ENST00000377865 DRD4P21917 467 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 COPB2P35606 906 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 NLRP9Q7RTR0 991 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 NIM1KQ8IY84 436 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 SLC26A7Q8TE54 656 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 PPWD1Q96BP3 646 aaKnown RBP9.25□□□□□ -0.93
PCDH9-202ENST00000377865 ARHGEF26Q96DR7 871 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 SLC38A10Q9HBR0 1119 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 PCDHB2Q9Y5E7 798 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 NALCNQ8IZF0 1738 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 TM9SF1O15321 606 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 CALB2P22676 271 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 SNRNP35Q16560 246 aaKnown RBP9.25□□□□□ -0.93
PCDH9-202ENST00000377865 C4orf22Q6V702 233 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 MED24O75448 989 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 SNUPNO95149 360 aaKnown RBP9.25□□□□□ -0.93
PCDH9-202ENST00000377865 ADRA2BP18089 450 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 TNFRSF25Q93038 417 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 CNKSR1Q969H4 720 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 KCNK16Q96T55 309 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 MTRQ99707 1265 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 OLFML3Q9NRN5 406 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 DAGLAQ9Y4D2 1042 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 FER1L4A9Z1Z3 1794 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 YWHABP31946 246 aaKnown RBP9.25□□□□□ -0.93
PCDH9-202ENST00000377865 MRPS9P82933 396 aaKnown RBP9.25□□□□□ -0.93
PCDH9-202ENST00000377865 PTK7Q13308 1070 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 IL17AQ16552 155 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 ZNF699Q32M78 642 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 ZNF667Q5HYK9 610 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 RNF43Q68DV7 783 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 NLGN1Q8N2Q7 840 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 APBB2Q92870 758 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 CMTM5Q96DZ9 223 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 RPF1Q9H9Y2 349 aaKnown RBP9.25□□□□□ -0.93
PCDH9-202ENST00000377865 BLOC1S4Q9NUP1 217 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 WDR35Q9P2L0 1181 aa9.25□□□□□ -0.93
PCDH9-202ENST00000377865 EIF4E1BA6NMX2 242 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 ECM2O94769 699 aaPredicted RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 ATP5BP06576 529 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 HSPA13P48723 471 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 EIF3EP60228 445 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 SLC30A5Q8TAD4 765 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 RUSC1Q9BVN2 902 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 XPO7Q9UIA9 1087 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 HAO1Q9UJM8 370 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 A8MXQ7 604 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 CAPN9O14815 690 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 ITGA4P13612 1032 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 RPL21P46778 160 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 KCNJ1P48048 391 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 DRG2P55039 364 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 DNAJC3Q13217 504 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 MORF4L2Q15014 288 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 RCN1Q15293 331 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 MAPRE2Q15555 327 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 ZC2HC1CQ53FD0 456 aaPredicted RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 RC3H1Q5TC82 1133 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 C16orf89Q6UX73 402 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 CEP70Q8NHQ1 597 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 RIT2Q99578 217 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 MED10Q9BTT4 135 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 KDM3BQ7LBC6 1761 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 ZC3H11AO75152 810 aaKnown RBP eCLIP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 GPC3P51654 580 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 EPHB1P54762 984 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 ALDH18A1P54886 795 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 NLRP11P59045 1033 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 PHEXP78562 749 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 HP1BP3Q5SSJ5 553 aaPredicted RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 IQCKQ8N0W5 287 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 RBBP8NLQ8NC74 664 aaPredicted RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 HEXIM2Q96MH2 286 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 OSGEPQ9NPF4 335 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 ACTL7BQ9Y614 415 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 ATP8B3O60423 1300 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 MYO3BQ8WXR4 1341 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 CFLARO15519 480 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 XPOTO43592 962 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 MAPTP10636 758 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 TAC1P20366 129 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 CCNG2Q16589 344 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 SPOPLQ6IQ16 392 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 SCARA5Q6ZMJ2 495 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 LRRC55Q6ZSA7 311 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 ZBTB33Q86T24 672 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 MFN1Q8IWA4 741 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 DTX3LQ8TDB6 740 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 SCFD2Q8WU76 684 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 MTMR9Q96QG7 549 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms