RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 VARS2Q5ST30 1063 aaKnown RBP16.12■□□□□ 0.17
HDAC6-204ENST00000376643 ZNF280DQ6N043 979 aa16.12■□□□□ 0.17
HDAC6-204ENST00000376643 CALML4Q96GE6 196 aa16.12■□□□□ 0.17
HDAC6-204ENST00000376643 ANKFY1Q9P2R3 1169 aa16.12■□□□□ 0.17
HDAC6-204ENST00000376643 ODF2LQ9ULJ1 636 aa16.12■□□□□ 0.17
HDAC6-204ENST00000376643 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-204ENST00000376643 DOCK8Q8NF50 2099 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 PI15O43692 258 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 MICAL2O94851 1124 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 ATF2P15336 505 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 PTPN2P17706 415 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 MARCKSP29966 332 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-204ENST00000376643 MCM4P33991 863 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 FOXK2Q01167 660 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 ROR1Q01973 937 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 MAPK7Q13164 816 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 C8orf34Q49A92 452 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 IQCEQ6IPM2 695 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 FRMD5Q7Z6J6 570 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 TCEAL8Q8IYN2 117 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 CEP120Q8N960 986 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 KCNN1Q92952 543 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 BICD1Q96G01 975 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 NELL2Q99435 816 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 BCO2Q9BYV7 579 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 OSBPL6Q9BZF3 934 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 GOLGA2P5Q9HBQ8 144 aa16.11■□□□□ 0.17
HDAC6-204ENST00000376643 MRPS17Q9Y2R5 130 aaKnown RBP16.11■□□□□ 0.17
HDAC6-204ENST00000376643 VWA3AA6NCI4 1184 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 PP2D1A8MPX8 630 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 NCAM2O15394 837 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 ADAM12O43184 909 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 ECI2O75521 394 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 ABLIM3O94929 683 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 CLTAP09496 248 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 PLA2G4BP0C869 781 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 MAPTP10636 758 aaKnown RBP16.1■□□□□ 0.17
HDAC6-204ENST00000376643 HARSP12081 509 aaKnown RBP16.1■□□□□ 0.17
HDAC6-204ENST00000376643 UBA7P41226 1012 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 BRCC3P46736 316 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 MCL1Q07820 350 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 CTXN3Q4LDR2 81 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 PARM1Q6UWI2 310 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 NPAS3Q8IXF0 933 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 TMEM161BQ8NDZ6 487 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 PJA1Q8NG27 643 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 RASSF8Q8NHQ8 419 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 FGF14Q92915 247 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 SUSD3Q96L08 255 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 MMTAG2Q9BU76 263 aaKnown RBP16.1■□□□□ 0.17
HDAC6-204ENST00000376643 CXCL16Q9H2A7 254 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 POLD4Q9HCU8 107 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 SMC3Q9UQE7 1217 aa16.1■□□□□ 0.17
HDAC6-204ENST00000376643 KANSL1LA0AUZ9 987 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 RHOP08100 348 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 CYP3A5P20815 502 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 CDC25AP30304 524 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 SLC12A3P55017 1021 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 GPC5P78333 572 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 NTHL1P78549 312 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 PPP2R3AQ06190 1150 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 SOX4Q06945 474 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-204ENST00000376643 PLD1Q13393 1074 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 MLF2Q15773 248 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-204ENST00000376643 CYP4A22Q5TCH4 519 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 CD300LGQ6UXG3 332 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 ASCL5Q7RTU5 278 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 TAS1R3Q7RTX0 852 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 BRAPQ7Z569 592 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 CD302Q8IX05 232 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 C3orf58Q8NDZ4 430 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 TMX3Q96JJ7 454 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 CYP4F11Q9HBI6 524 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 DNMT3BQ9UBC3 853 aaKnown RBP16.09■□□□□ 0.17
HDAC6-204ENST00000376643 UBQLN1Q9UMX0 589 aaKnown RBP16.09■□□□□ 0.17
HDAC6-204ENST00000376643 PCDHB8Q9UN66 801 aa16.09■□□□□ 0.17
HDAC6-204ENST00000376643 ZFHX2Q9C0A1 2572 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-204ENST00000376643 ABLIM1O14639 778 aa16.08■□□□□ 0.16
HDAC6-204ENST00000376643 GJB2P29033 226 aa16.08■□□□□ 0.16
HDAC6-204ENST00000376643 LIG4P49917 911 aa16.08■□□□□ 0.16
HDAC6-204ENST00000376643 YWHAHQ04917 246 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-204ENST00000376643 MRPL58Q14197 206 aaKnown RBP16.08■□□□□ 0.16
HDAC6-204ENST00000376643 IL17AQ16552 155 aa16.08■□□□□ 0.16
HDAC6-204ENST00000376643 TMEM119Q4V9L6 283 aa16.08■□□□□ 0.16
HDAC6-204ENST00000376643 PDZD4Q76G19 769 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-204ENST00000376643 KCNK18Q7Z418 384 aa16.08■□□□□ 0.16
HDAC6-204ENST00000376643 USP37Q86T82 979 aa16.08■□□□□ 0.16
HDAC6-204ENST00000376643 C1orf210Q8IVY1 113 aa16.08■□□□□ 0.16
HDAC6-204ENST00000376643 ITFG1Q8TB96 612 aa16.08■□□□□ 0.16
HDAC6-204ENST00000376643 KCNG4Q8TDN1 519 aa16.08■□□□□ 0.16
HDAC6-204ENST00000376643 DNASE1L2Q92874 299 aa16.08■□□□□ 0.16
HDAC6-204ENST00000376643 ELSPBP1Q96BH3 223 aa16.08■□□□□ 0.16
HDAC6-204ENST00000376643 ZNF512Q96ME7 567 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-204ENST00000376643 ZMAT2Q96NC0 199 aaKnown RBP16.08■□□□□ 0.16
HDAC6-204ENST00000376643 AFF4Q9UHB7 1163 aaKnown RBP16.08■□□□□ 0.16
HDAC6-204ENST00000376643 FBXL5Q9UKA1 691 aa16.08■□□□□ 0.16
HDAC6-204ENST00000376643 PTPRZ1P23471 2315 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-204ENST00000376643 WDR27A2RRH5 827 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 SFI1A8K8P3 1242 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 I3L4J1 428 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms