RNA–Protein interactions for RNA: ENST00000376504.3

PTF1A-201, Transcript of pancreas associated transcription factor 1a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTF1A, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1A-201ENST00000376504 SIX4Q9UIU6 781 aa34.41■■■■□ 3.1
PTF1A-201ENST00000376504 UBQLN1Q9UMX0 589 aaKnown RBP34.41■■■■□ 3.1
PTF1A-201ENST00000376504 APBA1Q02410 837 aa34.4■■■■□ 3.1
PTF1A-201ENST00000376504 CETN1Q12798 172 aa34.4■■■■□ 3.1
PTF1A-201ENST00000376504 NAB2Q15742 525 aa34.4■■■■□ 3.1
PTF1A-201ENST00000376504 SPECC1LQ69YQ0 1117 aa34.4■■■■□ 3.1
PTF1A-201ENST00000376504 NPAS4Q8IUM7 802 aa34.4■■■■□ 3.1
PTF1A-201ENST00000376504 HELQQ8TDG4 1101 aa34.4■■■■□ 3.1
PTF1A-201ENST00000376504 PDLIM2Q96JY6 352 aa34.4■■■■□ 3.1
PTF1A-201ENST00000376504 SIX2Q9NPC8 291 aa34.4■■■■□ 3.1
PTF1A-201ENST00000376504 RAB20Q9NX57 234 aa34.4■■■■□ 3.1
PTF1A-201ENST00000376504 DPP3Q9NY33 737 aa34.4■■■■□ 3.1
PTF1A-201ENST00000376504 CST3P01034 146 aaPredicted RBP34.4■■■■□ 3.1
PTF1A-201ENST00000376504 ACTN1P12814 892 aa34.4■■■■□ 3.1
PTF1A-201ENST00000376504 SOX4Q06945 474 aaPredicted RBP34.4■■■■□ 3.1
PTF1A-201ENST00000376504 TRIM65Q6PJ69 517 aa34.4■■■■□ 3.1
PTF1A-201ENST00000376504 LRFN2Q9ULH4 789 aa34.4■■■■□ 3.1
PTF1A-201ENST00000376504 SCN1AP35498 2009 aa34.39■■■■□ 3.1
PTF1A-201ENST00000376504 PHACTR2O75167 634 aa34.39■■■■□ 3.1
PTF1A-201ENST00000376504 BAIAP3O94812 1187 aa34.39■■■■□ 3.1
PTF1A-201ENST00000376504 PIK3CAP42336 1068 aa34.39■■■■□ 3.1
PTF1A-201ENST00000376504 NCOA4Q13772 614 aa34.39■■■■□ 3.1
PTF1A-201ENST00000376504 GLB1LQ6UWU2 654 aa34.39■■■■□ 3.1
PTF1A-201ENST00000376504 BEST2Q8NFU1 509 aa34.39■■■■□ 3.1
PTF1A-201ENST00000376504 PCMTD1Q96MG8 357 aaPredicted RBP34.39■■■■□ 3.1
PTF1A-201ENST00000376504 INPP5FQ9Y2H2 1132 aa34.39■■■■□ 3.1
PTF1A-201ENST00000376504 EPHB6O15197 1021 aa34.38■■■■□ 3.09
PTF1A-201ENST00000376504 EFCAB14O75071 495 aa34.38■■■■□ 3.09
PTF1A-201ENST00000376504 NOL4O94818 638 aa34.38■■■■□ 3.09
PTF1A-201ENST00000376504 THP07101 528 aa34.38■■■■□ 3.09
PTF1A-201ENST00000376504 WDR5P61964 334 aaKnown RBP34.38■■■■□ 3.09
PTF1A-201ENST00000376504 ZNF365Q70YC5 407 aa34.38■■■■□ 3.09
PTF1A-201ENST00000376504 PLCB1Q9NQ66 1216 aa34.38■■■■□ 3.09
PTF1A-201ENST00000376504 ITGA11Q9UKX5 1188 aa34.38■■■■□ 3.09
PTF1A-201ENST00000376504 ITGB3P05106 788 aa34.37■■■■□ 3.09
PTF1A-201ENST00000376504 CYP3A5P20815 502 aa34.37■■■■□ 3.09
PTF1A-201ENST00000376504 OTOP2Q7RTS6 562 aa34.37■■■■□ 3.09
PTF1A-201ENST00000376504 SPC24Q8NBT2 197 aa34.37■■■■□ 3.09
PTF1A-201ENST00000376504 GANQ9H2C0 597 aa34.37■■■■□ 3.09
PTF1A-201ENST00000376504 FAM207AQ9NSI2 230 aaPredicted RBP34.37■■■■□ 3.09
PTF1A-201ENST00000376504 XPOTO43592 962 aaKnown RBP34.36■■■■□ 3.09
PTF1A-201ENST00000376504 POMCP01189 267 aa34.36■■■■□ 3.09
PTF1A-201ENST00000376504 GATMP50440 423 aa34.36■■■■□ 3.09
PTF1A-201ENST00000376504 DEFB103AP81534 67 aa34.36■■■■□ 3.09
PTF1A-201ENST00000376504 TBX2Q13207 712 aaPredicted RBP34.36■■■■□ 3.09
PTF1A-201ENST00000376504 TMEM240Q5SV17 173 aa34.36■■■■□ 3.09
PTF1A-201ENST00000376504 DRC7Q8IY82 874 aa34.36■■■■□ 3.09
PTF1A-201ENST00000376504 ELMO3Q96BJ8 720 aa34.36■■■■□ 3.09
PTF1A-201ENST00000376504 PI4K2AQ9BTU6 479 aa34.36■■■■□ 3.09
PTF1A-201ENST00000376504 TTYH3Q9C0H2 523 aa34.36■■■■□ 3.09
PTF1A-201ENST00000376504 GOLGA2P5Q9HBQ8 144 aa34.36■■■■□ 3.09
PTF1A-201ENST00000376504 RNF216Q9NWF9 866 aaPredicted RBP34.36■■■■□ 3.09
PTF1A-201ENST00000376504 COL4A6Q14031 1691 aa34.36■■■■□ 3.09
PTF1A-201ENST00000376504 FGBP02675 491 aa34.35■■■■□ 3.09
PTF1A-201ENST00000376504 MYL6P60660 151 aa34.35■■■■□ 3.09
PTF1A-201ENST00000376504 GRIK3Q13003 919 aa34.35■■■■□ 3.09
PTF1A-201ENST00000376504 NOMO2Q5JPE7 1267 aa34.35■■■■□ 3.09
PTF1A-201ENST00000376504 KLHDC7AQ5VTJ3 777 aa34.35■■■■□ 3.09
PTF1A-201ENST00000376504 CASD1Q96PB1 797 aa34.35■■■■□ 3.09
PTF1A-201ENST00000376504 UTP3Q9NQZ2 479 aaKnown RBP eCLIP34.35■■■■□ 3.09
PTF1A-201ENST00000376504 SLC38A7Q9NVC3 462 aa34.35■■■■□ 3.09
PTF1A-201ENST00000376504 POLR2BP30876 1174 aaKnown RBP34.35■■■■□ 3.09
PTF1A-201ENST00000376504 NEK11Q8NG66 645 aa34.35■■■■□ 3.09
PTF1A-201ENST00000376504 TOP1MTQ969P6 601 aa34.35■■■■□ 3.09
PTF1A-201ENST00000376504 BUD13Q9BRD0 619 aaKnown RBP eCLIP34.35■■■■□ 3.09
PTF1A-201ENST00000376504 XYLT2Q9H1B5 865 aa34.35■■■■□ 3.09
PTF1A-201ENST00000376504 ANO9A1A5B4 782 aa34.34■■■■□ 3.09
PTF1A-201ENST00000376504 AMHP03971 560 aa34.34■■■■□ 3.09
PTF1A-201ENST00000376504 KRT19P08727 400 aa34.34■■■■□ 3.09
PTF1A-201ENST00000376504 TRPC3Q13507 836 aa34.34■■■■□ 3.09
PTF1A-201ENST00000376504 FIGNQ5HY92 759 aa34.34■■■■□ 3.09
PTF1A-201ENST00000376504 PSRC1Q6PGN9 363 aaPredicted RBP34.34■■■■□ 3.09
PTF1A-201ENST00000376504 AGAP1Q9UPQ3 857 aa34.34■■■■□ 3.09
PTF1A-201ENST00000376504 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP34.34■■■■□ 3.09
PTF1A-201ENST00000376504 PPEF2O14830 753 aa34.33■■■■□ 3.09
PTF1A-201ENST00000376504 HOXA2O43364 376 aa34.33■■■■□ 3.09
PTF1A-201ENST00000376504 ASS1P00966 412 aaKnown RBP34.33■■■■□ 3.09
PTF1A-201ENST00000376504 GYPCP04921 128 aa34.33■■■■□ 3.09
PTF1A-201ENST00000376504 LRPAP1P30533 357 aa34.33■■■■□ 3.09
PTF1A-201ENST00000376504 C9orf57Q5W0N0 161 aa34.33■■■■□ 3.09
PTF1A-201ENST00000376504 PHLDB3Q6NSJ2 640 aa34.33■■■■□ 3.09
PTF1A-201ENST00000376504 URGCPQ8TCY9 931 aa34.33■■■■□ 3.09
PTF1A-201ENST00000376504 LBHD1Q9BQE6 289 aaPredicted RBP34.33■■■■□ 3.09
PTF1A-201ENST00000376504 NUP58Q9BVL2 599 aa34.33■■■■□ 3.09
PTF1A-201ENST00000376504 APOBEC3GQ9HC16 384 aaKnown RBP34.33■■■■□ 3.09
PTF1A-201ENST00000376504 ZC3H11AO75152 810 aaKnown RBP eCLIP34.32■■■■□ 3.08
PTF1A-201ENST00000376504 UPP2O95045 317 aa34.32■■■■□ 3.08
PTF1A-201ENST00000376504 TRIM21P19474 475 aaKnown RBP34.32■■■■□ 3.08
PTF1A-201ENST00000376504 RBP5P82980 135 aa34.32■■■■□ 3.08
PTF1A-201ENST00000376504 LRMPQ12912 555 aa34.32■■■■□ 3.08
PTF1A-201ENST00000376504 SPOPLQ6IQ16 392 aa34.32■■■■□ 3.08
PTF1A-201ENST00000376504 GJB7Q6PEY0 223 aa34.32■■■■□ 3.08
PTF1A-201ENST00000376504 ARHGEF19Q8IW93 802 aa34.32■■■■□ 3.08
PTF1A-201ENST00000376504 TATDN2Q93075 761 aa34.32■■■■□ 3.08
PTF1A-201ENST00000376504 TBC1D13Q9NVG8 400 aa34.32■■■■□ 3.08
PTF1A-201ENST00000376504 APEX2Q9UBZ4 518 aa34.32■■■■□ 3.08
PTF1A-201ENST00000376504 AJAP1Q9UKB5 411 aaPredicted RBP34.32■■■■□ 3.08
PTF1A-201ENST00000376504 RNF225M0QZC1 329 aaPredicted RBP34.31■■■■□ 3.08
PTF1A-201ENST00000376504 ABI1Q8IZP0 508 aa34.31■■■■□ 3.08
PTF1A-201ENST00000376504 CACNG4Q9UBN1 327 aa34.31■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms