RNA–Protein interactions for RNA: ENST00000376303.6

SYP-202, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 858 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-202ENST00000376303 ZFHX2Q9C0A1 2572 aaPredicted RBP19.25■□□□□ 0.67
SYP-202ENST00000376303 KRBA1A5PL33 1030 aa19.24■□□□□ 0.67
SYP-202ENST00000376303 PI15O43692 258 aa19.24■□□□□ 0.67
SYP-202ENST00000376303 UBA7P41226 1012 aa19.24■□□□□ 0.67
SYP-202ENST00000376303 NCKAP1LP55160 1127 aa19.24■□□□□ 0.67
SYP-202ENST00000376303 NTHL1P78549 312 aa19.24■□□□□ 0.67
SYP-202ENST00000376303 MCL1Q07820 350 aa19.24■□□□□ 0.67
SYP-202ENST00000376303 ARSHQ5FYA8 562 aa19.24■□□□□ 0.67
SYP-202ENST00000376303 VARS2Q5ST30 1063 aaKnown RBP19.24■□□□□ 0.67
SYP-202ENST00000376303 BRAPQ7Z569 592 aa19.24■□□□□ 0.67
SYP-202ENST00000376303 ZNF461Q8TAF7 563 aa19.24■□□□□ 0.67
SYP-202ENST00000376303 TBC1D32Q96NH3 1257 aa19.24■□□□□ 0.67
SYP-202ENST00000376303 PTPRZ1P23471 2315 aaPredicted RBP19.24■□□□□ 0.67
SYP-202ENST00000376303 PROB1E7EW31 1015 aa19.23■□□□□ 0.67
SYP-202ENST00000376303 STK25O00506 426 aa19.23■□□□□ 0.67
SYP-202ENST00000376303 SCP2P22307 547 aa19.23■□□□□ 0.67
SYP-202ENST00000376303 CACNB1Q02641 598 aaPredicted RBP19.23■□□□□ 0.67
SYP-202ENST00000376303 SLC10A6Q3KNW5 377 aa19.23■□□□□ 0.67
SYP-202ENST00000376303 MTSS1LQ765P7 747 aa19.23■□□□□ 0.67
SYP-202ENST00000376303 CCDC105Q8IYK2 499 aa19.23■□□□□ 0.67
SYP-202ENST00000376303 GPR152Q8TDT2 470 aa19.23■□□□□ 0.67
SYP-202ENST00000376303 FGF13Q92913 245 aa19.23■□□□□ 0.67
SYP-202ENST00000376303 C18orf25Q96B23 403 aaPredicted RBP19.23■□□□□ 0.67
SYP-202ENST00000376303 PLEKHA5Q9HAU0 1116 aa19.23■□□□□ 0.67
SYP-202ENST00000376303 SLC2A4RGQ9NR83 387 aa19.23■□□□□ 0.67
SYP-202ENST00000376303 KCNH3Q9ULD8 1083 aa19.23■□□□□ 0.67
SYP-202ENST00000376303 CA14Q9ULX7 337 aa19.23■□□□□ 0.67
SYP-202ENST00000376303 RIF1Q5UIP0 2472 aaKnown RBP19.23■□□□□ 0.67
SYP-202ENST00000376303 VPS13AQ96RL7 3174 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 NPHP3-ACAD11A0A0J9YXS1 232 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 H7C4K7 107 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 MEFVO15553 781 aaPredicted RBP19.22■□□□□ 0.67
SYP-202ENST00000376303 GFRA3O60609 400 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 ABLIM3O94929 683 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 RFX1P22670 979 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 ELF1P32519 619 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 LONP1P36776 959 aaKnown RBP19.22■□□□□ 0.67
SYP-202ENST00000376303 MATR3P43243 847 aaKnown RBP eCLIP19.22■□□□□ 0.67
SYP-202ENST00000376303 ROR1Q01973 937 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 MRPL58Q14197 206 aaKnown RBP19.22■□□□□ 0.67
SYP-202ENST00000376303 PABPC1LQ4VXU2 614 aaKnown RBP19.22■□□□□ 0.67
SYP-202ENST00000376303 SEZ6Q53EL9 994 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 PARM1Q6UWI2 310 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 HAUS6Q7Z4H7 955 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 FGF14Q92915 247 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 BICD1Q96G01 975 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 SUSD3Q96L08 255 aa19.22■□□□□ 0.67
SYP-202ENST00000376303 DNMT3BQ9UBC3 853 aaKnown RBP19.22■□□□□ 0.67
SYP-202ENST00000376303 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.22■□□□□ 0.67
SYP-202ENST00000376303 ARHGEF37A1IGU5 675 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 WDR27A2RRH5 827 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 TBC1D4O60343 1298 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 CLTAP09496 248 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 ATF2P15336 505 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 MCM4P33991 863 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 NBL1P41271 181 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 KYAT1Q16773 422 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 PHLDB3Q6NSJ2 640 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 GPBP1Q86WP2 473 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 ITFG1Q8TB96 612 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 REEP2Q9BRK0 252 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 HCFC1R1Q9NWW0 138 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 FAM186AA6NE01 2351 aa19.21■□□□□ 0.67
SYP-202ENST00000376303 MIA3Q5JRA6 1907 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 LRG1P02750 347 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 CXCL8P10145 99 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 LIG4P49917 911 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 TPGS2Q68CL5 300 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 MYCT1Q8N699 235 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 DTWD2Q8NBA8 298 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 APPL2Q8NEU8 664 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 ST13P5Q8NFI4 369 aaPredicted RBP19.2■□□□□ 0.66
SYP-202ENST00000376303 RPP25Q9BUL9 199 aaKnown RBP19.2■□□□□ 0.66
SYP-202ENST00000376303 HAPLN2Q9GZV7 340 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 TBC1D17Q9HA65 648 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 PARVGQ9HBI0 331 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 AVENQ9NQS1 362 aaPredicted RBP19.2■□□□□ 0.66
SYP-202ENST00000376303 ARHGEF3Q9NR81 526 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 BLOC1S4Q9NUP1 217 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 FBXL5Q9UKA1 691 aa19.2■□□□□ 0.66
SYP-202ENST00000376303 TTC26A0AVF1 554 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 PRRG1O14668 218 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 HNRNPDLO14979 420 aaKnown RBP19.19■□□□□ 0.66
SYP-202ENST00000376303 FAM13AO94988 1023 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 RHOP08100 348 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 PTPN2P17706 415 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 CYP3A5P20815 502 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 ABCD1P33897 745 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 ZNF131P52739 623 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 ARPP19P56211 112 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 DHX8Q14562 1220 aaKnown RBP19.19■□□□□ 0.66
SYP-202ENST00000376303 SF3A1Q15459 793 aaKnown RBP19.19■□□□□ 0.66
SYP-202ENST00000376303 CTXN3Q4LDR2 81 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 ZNF280DQ6N043 979 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 NPAS3Q8IXF0 933 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 TCEAL8Q8IYN2 117 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 RASSF8Q8NHQ8 419 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 RAD54LQ92698 747 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 DDX12PQ92771 950 aa19.19■□□□□ 0.66
SYP-202ENST00000376303 TUBGCP4Q9UGJ1 667 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 446 ms