RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 PRKAA2P54646 552 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ORC2Q13416 577 aaPredicted RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 LPIN1Q14693 890 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ANKRD23Q86SG2 305 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 KCNF1Q9H3M0 494 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 DNAJB4Q9UDY4 337 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 TRIM10Q9UDY6 481 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 GCNT3O95395 438 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 FAM228BP0C875 321 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 PPIL2Q13356 520 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 FAM173BQ6P4H8 233 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 IFNA14P01570 189 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 ACMSDQ8TDX5 336 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 AP3S1Q92572 193 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.94□□□□□ -1.32e-7■■■■■ 62.8
UBR4-204ENST00000375254 CNDP1Q96KN2 507 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 TMEM79Q9BSE2 394 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 C1orf112Q9NSG2 853 aa6.94□□□□□ -1.3
UBR4-204ENST00000375254 RTCBQ9Y3I0 505 aaKnown RBP6.94□□□□□ -1.3
UBR4-204ENST00000375254 SNRPAP09012 282 aaKnown RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 ZNF829Q3KNS6 432 aaPredicted RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 CNOT6LQ96LI5 555 aaKnown RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 ECDO95905 644 aaPredicted RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 SARSP49591 514 aaKnown RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 C3orf62Q6ZUJ4 267 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 E2F7Q96AV8 911 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 ZC3H10Q96K80 434 aaKnown RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 BTBD9Q96Q07 612 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 SPRTNQ9H040 489 aaPredicted RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 RUBCNLQ9H714 662 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 NPHS2Q9NP85 383 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 SLC12A4Q9UP95 1085 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 RGS12O14924 1447 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 NCF4Q15080 339 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 RTKN2Q8IZC4 609 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 SLC8A2Q9UPR5 921 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 FAM227BQ96M60 508 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 VPS11Q9H270 941 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 CAMSAP2Q08AD1 1489 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 PTPREP23469 700 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 EGFLAMQ63HQ2 1017 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 NCCRP1Q6ZVX7 275 aaPredicted RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 RRM2BQ7LG56 351 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 BNIPLQ7Z465 357 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 FAF2Q96CS3 445 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 ZNF862O60290 1169 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 COBLO75128 1261 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 CYP27A1Q02318 531 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 ZNF268Q14587 947 aaPredicted RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 NR1D2Q14995 579 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 LIN54Q6MZP7 749 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 KCTD4Q8WVF5 259 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 SYMPKQ92797 1274 aaKnown RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 ERLEC1Q96DZ1 483 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 CDYLQ9Y232 598 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 PVALEFA0A1B0GWK0 134 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 TNFRSF21O75509 655 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 TPPPO94811 219 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 OR52Z1P0C646 297 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 ALOX15P16050 662 aaPredicted RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 RCAN1P53805 252 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 VTI1BQ9UEU0 232 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 MAPRE3Q9UPY8 281 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 M0R2C6 588 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 ITGAXP20702 1163 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 KYQ8NBH2 561 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 KLHL32Q96NJ5 620 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 YTHDF1Q9BYJ9 559 aaKnown RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 BLZF1Q9H2G9 400 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 VTA1Q9NP79 307 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 USE1Q9NZ43 259 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 POLIQ9UNA4 740 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 EFCAB10A6NFE3 127 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 DLG1Q12959 904 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 UGP2Q16851 508 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 SPERTQ8NA61 448 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 ZMYM6O95789 1325 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 IGF1RP08069 1367 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 ANKRD50Q9ULJ7 1429 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 FGAP02671 866 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 ALOX12P18054 663 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 ADAM17P78536 824 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 CHRNB3Q05901 458 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 IFRD2Q12894 506 aaPredicted RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 ATP1A4Q13733 1029 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 MZT2AQ6P582 158 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 MTMR9Q96QG7 549 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 AIFM2Q9BRQ8 373 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 GPATCH1Q9BRR8 931 aaKnown RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 DDAH1O94760 285 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 UFL1O94874 794 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 NPEPPSP55786 919 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 MTDHQ86UE4 582 aaKnown RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 AVENQ9NQS1 362 aaPredicted RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 THAP1Q9NVV9 213 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 CLIC4Q9Y696 253 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 MEI4A8MW99 385 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 HAT1O14929 419 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 TXKP42681 527 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 PTGDRQ13258 359 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms