RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 ELF1P32519 619 aa17.62■□□□□ 0.41
VMA21-202ENST00000370361 PHLDB3Q6NSJ2 640 aa17.62■□□□□ 0.41
VMA21-202ENST00000370361 CD300LGQ6UXG3 332 aa17.62■□□□□ 0.41
VMA21-202ENST00000370361 CCDC105Q8IYK2 499 aa17.62■□□□□ 0.41
VMA21-202ENST00000370361 BICD1Q96G01 975 aa17.62■□□□□ 0.41
VMA21-202ENST00000370361 SUSD3Q96L08 255 aa17.62■□□□□ 0.41
VMA21-202ENST00000370361 PARVGQ9HBI0 331 aa17.62■□□□□ 0.41
VMA21-202ENST00000370361 PDCD11Q14690 1871 aaKnown RBP17.61■□□□□ 0.41
VMA21-202ENST00000370361 SFI1A8K8P3 1242 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 ADAM12O43184 909 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 ABLIM3O94929 683 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 PIGRP01833 764 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 MYBP10242 640 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 NPR3P17342 541 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 NBL1P41271 181 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 ZNF131P52739 623 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 PFKPQ01813 784 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 SOX4Q06945 474 aaPredicted RBP17.61■□□□□ 0.41
VMA21-202ENST00000370361 PABPC1LQ4VXU2 614 aaKnown RBP17.61■□□□□ 0.41
VMA21-202ENST00000370361 VARS2Q5ST30 1063 aaKnown RBP17.61■□□□□ 0.41
VMA21-202ENST00000370361 ZNF280DQ6N043 979 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 HAUS6Q7Z4H7 955 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 CD302Q8IX05 232 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 C3orf58Q8NDZ4 430 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 RASSF8Q8NHQ8 419 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 ZMAT2Q96NC0 199 aaKnown RBP17.61■□□□□ 0.41
VMA21-202ENST00000370361 GOLGA2P5Q9HBQ8 144 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 GDE1Q9NZC3 331 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 POLIQ9UNA4 740 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 NUMBLQ9Y6R0 609 aa17.61■□□□□ 0.41
VMA21-202ENST00000370361 H0Y858 1186 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 HNRNPDLO14979 420 aaKnown RBP17.6■□□□□ 0.41
VMA21-202ENST00000370361 CCL16O15467 120 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 TBC1D4O60343 1298 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 MICAL2O94851 1124 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 FAM13AO94988 1023 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 LRG1P02750 347 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 CFHP08603 1231 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 ATF2P15336 505 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 MATR3P43243 847 aaKnown RBP eCLIP17.6■□□□□ 0.41
VMA21-202ENST00000370361 BRCC3P46736 316 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 LIG4P49917 911 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 ROR1Q01973 937 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 PPP2R3AQ06190 1150 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 RAD51AP2Q09MP3 1159 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 MRPL58Q14197 206 aaKnown RBP17.6■□□□□ 0.41
VMA21-202ENST00000370361 SLC10A6Q3KNW5 377 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 GPBP1Q86WP2 473 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 TCEAL8Q8IYN2 117 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 LEMD2Q8NC56 503 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 FGF13Q92913 245 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 ARHGEF3Q9NR81 526 aa17.6■□□□□ 0.41
VMA21-202ENST00000370361 UBQLN1Q9UMX0 589 aaKnown RBP17.6■□□□□ 0.41
VMA21-202ENST00000370361 ZNF197O14709 1029 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 NARSO43776 548 aaKnown RBP17.59■□□□□ 0.41
VMA21-202ENST00000370361 GFRA3O60609 400 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 TBCAO75347 108 aaKnown RBP17.59■□□□□ 0.41
VMA21-202ENST00000370361 HARSP12081 509 aaKnown RBP17.59■□□□□ 0.41
VMA21-202ENST00000370361 MARCKSP29966 332 aaPredicted RBP17.59■□□□□ 0.41
VMA21-202ENST00000370361 LRPAP1P30533 357 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 MCM4P33991 863 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 POU5F1Q01860 360 aaKnown RBP17.59■□□□□ 0.41
VMA21-202ENST00000370361 CUL4AQ13619 759 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 ARSHQ5FYA8 562 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 RSPO2Q6UXX9 243 aaPredicted RBP17.59■□□□□ 0.41
VMA21-202ENST00000370361 ELMOD1Q8N336 334 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 DTWD2Q8NBA8 298 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 RSAD2Q8WXG1 361 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 RAD54LQ92698 747 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 REEP2Q9BRK0 252 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 CCSER1Q9C0I3 900 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 TBX20Q9UMR3 447 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 PCDHB8Q9UN66 801 aa17.59■□□□□ 0.41
VMA21-202ENST00000370361 TTC26A0AVF1 554 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 K7ENM7 598 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 STK25O00506 426 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 PRRG1O14668 218 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 OGTO15294 1046 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 TRAK2O60296 914 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 KRT18P05783 430 aaKnown RBP17.58■□□□□ 0.4
VMA21-202ENST00000370361 ADRB2P07550 413 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 PTPN2P17706 415 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 PRKCQQ04759 706 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 CTXN3Q4LDR2 81 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 MYCT1Q8N699 235 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 GPR152Q8TDT2 470 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 LARP4BQ92615 738 aaKnown RBP17.58■□□□□ 0.4
VMA21-202ENST00000370361 ZBTB45Q96K62 511 aaPredicted RBP17.58■□□□□ 0.4
VMA21-202ENST00000370361 PLIN2Q99541 437 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 SEMA4AQ9H3S1 761 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 ST6GALNAC4Q9H4F1 302 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 TBC1D17Q9HA65 648 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 DNMT3BQ9UBC3 853 aaKnown RBP17.58■□□□□ 0.4
VMA21-202ENST00000370361 STK17AQ9UEE5 414 aa17.58■□□□□ 0.4
VMA21-202ENST00000370361 AFF4Q9UHB7 1163 aaKnown RBP17.58■□□□□ 0.4
VMA21-202ENST00000370361 MRPS23Q9Y3D9 190 aaKnown RBP17.58■□□□□ 0.4
VMA21-202ENST00000370361 MORC2Q9Y6X9 1032 aaPredicted RBP17.58■□□□□ 0.4
VMA21-202ENST00000370361 WDR27A2RRH5 827 aa17.57■□□□□ 0.4
VMA21-202ENST00000370361 KRBA1A5PL33 1030 aa17.57■□□□□ 0.4
VMA21-202ENST00000370361 I3L4J1 428 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms