RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 LCA5LO95447 670 aa25.72■■□□□ 1.71
SNX3-203ENST00000368979 ASS1P00966 412 aaKnown RBP25.72■■□□□ 1.71
SNX3-203ENST00000368979 YARSP54577 528 aaKnown RBP25.72■■□□□ 1.71
SNX3-203ENST00000368979 NFX1Q12986 1120 aaKnown RBP25.72■■□□□ 1.71
SNX3-203ENST00000368979 TMEM132DQ14C87 1099 aa25.72■■□□□ 1.71
SNX3-203ENST00000368979 TWF2Q6IBS0 349 aaKnown RBP25.72■■□□□ 1.71
SNX3-203ENST00000368979 SPOPLQ6IQ16 392 aa25.72■■□□□ 1.71
SNX3-203ENST00000368979 FAM126BQ8IXS8 530 aa25.72■■□□□ 1.71
SNX3-203ENST00000368979 SMG8Q8ND04 991 aaKnown RBP25.72■■□□□ 1.71
SNX3-203ENST00000368979 DEF6Q9H4E7 631 aa25.72■■□□□ 1.71
SNX3-203ENST00000368979 DERAQ9Y315 318 aa25.72■■□□□ 1.71
SNX3-203ENST00000368979 IPPQ9Y573 584 aa25.72■■□□□ 1.71
SNX3-203ENST00000368979 RECQL4O94761 1208 aa25.71■■□□□ 1.71
SNX3-203ENST00000368979 GHRP10912 638 aa25.71■■□□□ 1.71
SNX3-203ENST00000368979 CLCN1P35523 988 aa25.71■■□□□ 1.71
SNX3-203ENST00000368979 NOP14P78316 857 aaKnown RBP25.71■■□□□ 1.71
SNX3-203ENST00000368979 ALKAL1Q6UXT8 129 aa25.71■■□□□ 1.71
SNX3-203ENST00000368979 C1orf127Q8N9H9 656 aa25.71■■□□□ 1.71
SNX3-203ENST00000368979 ARMC5Q96C12 935 aa25.71■■□□□ 1.71
SNX3-203ENST00000368979 IMPG2Q9BZV3 1241 aa25.71■■□□□ 1.71
SNX3-203ENST00000368979 CNTN3Q9P232 1028 aa25.71■■□□□ 1.71
SNX3-203ENST00000368979 SIX4Q9UIU6 781 aa25.71■■□□□ 1.71
SNX3-203ENST00000368979 PADI3Q9ULW8 664 aa25.71■■□□□ 1.71
SNX3-203ENST00000368979 CCDC172P0C7W6 258 aa25.7■■□□□ 1.7
SNX3-203ENST00000368979 CD52P31358 61 aa25.7■■□□□ 1.7
SNX3-203ENST00000368979 MNX1P50219 401 aaPredicted RBP25.7■■□□□ 1.7
SNX3-203ENST00000368979 MYL6P60660 151 aa25.7■■□□□ 1.7
SNX3-203ENST00000368979 PTK2Q05397 1052 aa25.7■■□□□ 1.7
SNX3-203ENST00000368979 PAK2Q13177 524 aa25.7■■□□□ 1.7
SNX3-203ENST00000368979 TRPC3Q13507 836 aa25.7■■□□□ 1.7
SNX3-203ENST00000368979 USP38Q8NB14 1042 aa25.7■■□□□ 1.7
SNX3-203ENST00000368979 CXorf38Q8TB03 319 aa25.7■■□□□ 1.7
SNX3-203ENST00000368979 NUB1Q9Y5A7 615 aa25.7■■□□□ 1.7
SNX3-203ENST00000368979 GOLGA6L9A6NEM1 432 aa25.69■■□□□ 1.7
SNX3-203ENST00000368979 ZNF263O14978 683 aa25.69■■□□□ 1.7
SNX3-203ENST00000368979 AKR1B10O60218 316 aa25.69■■□□□ 1.7
SNX3-203ENST00000368979 LBX1P52954 281 aa25.69■■□□□ 1.7
SNX3-203ENST00000368979 KRT83P78385 493 aa25.69■■□□□ 1.7
SNX3-203ENST00000368979 PKN2Q16513 984 aaKnown RBP25.69■■□□□ 1.7
SNX3-203ENST00000368979 SGSM1Q2NKQ1 1148 aa25.69■■□□□ 1.7
SNX3-203ENST00000368979 NYAP1Q6ZVC0 841 aa25.69■■□□□ 1.7
SNX3-203ENST00000368979 ZNF571Q7Z3V5 609 aaPredicted RBP25.69■■□□□ 1.7
SNX3-203ENST00000368979 FAM71AQ8IYT1 594 aa25.69■■□□□ 1.7
SNX3-203ENST00000368979 CAGE1Q8TC20 777 aa25.69■■□□□ 1.7
SNX3-203ENST00000368979 U2AF1L4Q8WU68 220 aaKnown RBP25.69■■□□□ 1.7
SNX3-203ENST00000368979 XYLT2Q9H1B5 865 aa25.69■■□□□ 1.7
SNX3-203ENST00000368979 CXCL16Q9H2A7 254 aa25.69■■□□□ 1.7
SNX3-203ENST00000368979 PDCD11Q14690 1871 aaKnown RBP25.69■■□□□ 1.7
SNX3-203ENST00000368979 SGPL1O95470 568 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 CD4P01730 458 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 AKAP5P24588 427 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 ANXA13P27216 316 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 CUL2Q13617 745 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 XKR4Q5GH76 650 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 JAKMIP2Q96AA8 810 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 KIF12Q96FN5 646 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 SYT11Q9BT88 431 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 APOL6Q9BWW8 343 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 RNF39Q9H2S5 420 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 FAM105AQ9NUU6 356 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 UMODL1Q5DID0 1318 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 IPO7O95373 1038 aaKnown RBP25.68■■□□□ 1.7
SNX3-203ENST00000368979 TBXAS1P24557 533 aaPredicted RBP25.68■■□□□ 1.7
SNX3-203ENST00000368979 DSC3Q14574 896 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 ZBTB6Q15916 424 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 OLIG1Q8TAK6 271 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 TAF4BQ92750 862 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 ZMAT2Q96NC0 199 aaKnown RBP25.68■■□□□ 1.7
SNX3-203ENST00000368979 TSPAN18Q96SJ8 248 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 ARID3AQ99856 593 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 TRAIPQ9BWF2 469 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 ITGA11Q9UKX5 1188 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 PCDHB2Q9Y5E7 798 aa25.68■■□□□ 1.7
SNX3-203ENST00000368979 A0A0U1RQJ8 604 aa25.67■■□□□ 1.7
SNX3-203ENST00000368979 ITGB3P05106 788 aa25.67■■□□□ 1.7
SNX3-203ENST00000368979 GFPT1Q06210 699 aaPredicted RBP25.67■■□□□ 1.7
SNX3-203ENST00000368979 SPA17Q15506 151 aa25.67■■□□□ 1.7
SNX3-203ENST00000368979 SLC18A3Q16572 532 aa25.67■■□□□ 1.7
SNX3-203ENST00000368979 ATRIPQ8WXE1 791 aa25.67■■□□□ 1.7
SNX3-203ENST00000368979 CAPN15O75808 1086 aa25.66■■□□□ 1.7
SNX3-203ENST00000368979 ZSCAN20P17040 1043 aaPredicted RBP25.66■■□□□ 1.7
SNX3-203ENST00000368979 CTCFP49711 727 aaPredicted RBP25.66■■□□□ 1.7
SNX3-203ENST00000368979 CYP27A1Q02318 531 aa25.66■■□□□ 1.7
SNX3-203ENST00000368979 MBTPS1Q14703 1052 aa25.66■■□□□ 1.7
SNX3-203ENST00000368979 ZNF699Q32M78 642 aa25.66■■□□□ 1.7
SNX3-203ENST00000368979 TMEM130Q8N3G9 435 aa25.66■■□□□ 1.7
SNX3-203ENST00000368979 C16orf45Q96MC5 204 aaPredicted RBP25.66■■□□□ 1.7
SNX3-203ENST00000368979 NIF3L1Q9GZT8 377 aa25.66■■□□□ 1.7
SNX3-203ENST00000368979 DPP3Q9NY33 737 aa25.66■■□□□ 1.7
SNX3-203ENST00000368979 PARP2Q9UGN5 583 aa25.66■■□□□ 1.7
SNX3-203ENST00000368979 A0A087X0T9 212 aa25.65■■□□□ 1.7
SNX3-203ENST00000368979 MGEA5O60502 916 aa25.65■■□□□ 1.7
SNX3-203ENST00000368979 KRT19P08727 400 aa25.65■■□□□ 1.7
SNX3-203ENST00000368979 FAM228BP0C875 321 aa25.65■■□□□ 1.7
SNX3-203ENST00000368979 KCNE1P15382 129 aa25.65■■□□□ 1.7
SNX3-203ENST00000368979 ACO1P21399 889 aaKnown RBP25.65■■□□□ 1.7
SNX3-203ENST00000368979 ATICP31939 592 aa25.65■■□□□ 1.7
SNX3-203ENST00000368979 ZNF662Q6ZS27 426 aa25.65■■□□□ 1.7
SNX3-203ENST00000368979 UBR7Q8N806 425 aa25.65■■□□□ 1.7
SNX3-203ENST00000368979 VRTNQ9H8Y1 702 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms