RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 AVENQ9NQS1 362 aaPredicted RBP17.54■□□□□ 0.4
CKS1B-202ENST00000368436 KIF3AQ9Y496 699 aa17.54■□□□□ 0.4
CKS1B-202ENST00000368436 ARHGEF37A1IGU5 675 aa17.53■□□□□ 0.4
CKS1B-202ENST00000368436 SYN3O14994 580 aa17.53■□□□□ 0.4
CKS1B-202ENST00000368436 ROR1Q01973 937 aa17.53■□□□□ 0.4
CKS1B-202ENST00000368436 NPAS3Q8IXF0 933 aa17.53■□□□□ 0.4
CKS1B-202ENST00000368436 SYT2Q8N9I0 419 aaPredicted RBP17.53■□□□□ 0.4
CKS1B-202ENST00000368436 TMEM161BQ8NDZ6 487 aa17.53■□□□□ 0.4
CKS1B-202ENST00000368436 ZBTB45Q96K62 511 aaPredicted RBP17.53■□□□□ 0.4
CKS1B-202ENST00000368436 FANCMQ8IYD8 2048 aa17.53■□□□□ 0.4
CKS1B-202ENST00000368436 FAM186AA6NE01 2351 aa17.53■□□□□ 0.4
CKS1B-202ENST00000368436 RIF1Q5UIP0 2472 aaKnown RBP17.53■□□□□ 0.4
CKS1B-202ENST00000368436 PTPRZ1P23471 2315 aaPredicted RBP17.52■□□□□ 0.4
CKS1B-202ENST00000368436 WDR27A2RRH5 827 aa17.52■□□□□ 0.4
CKS1B-202ENST00000368436 TOM1L1O75674 476 aa17.52■□□□□ 0.4
CKS1B-202ENST00000368436 DCNP07585 359 aaKnown RBP17.52■□□□□ 0.4
CKS1B-202ENST00000368436 MAPTP10636 758 aaKnown RBP17.52■□□□□ 0.4
CKS1B-202ENST00000368436 PLS3P13797 630 aa17.52■□□□□ 0.4
CKS1B-202ENST00000368436 SLC12A3P55017 1021 aa17.52■□□□□ 0.4
CKS1B-202ENST00000368436 STRN3Q13033 797 aa17.52■□□□□ 0.4
CKS1B-202ENST00000368436 RABEP1Q15276 862 aa17.52■□□□□ 0.4
CKS1B-202ENST00000368436 SLC10A6Q3KNW5 377 aa17.52■□□□□ 0.4
CKS1B-202ENST00000368436 ZPBP2Q6X784 338 aa17.52■□□□□ 0.4
CKS1B-202ENST00000368436 PJA1Q8NG27 643 aa17.52■□□□□ 0.4
CKS1B-202ENST00000368436 C18orf25Q96B23 403 aaPredicted RBP17.52■□□□□ 0.4
CKS1B-202ENST00000368436 SHDQ96IW2 340 aa17.52■□□□□ 0.4
CKS1B-202ENST00000368436 DDX23Q9BUQ8 820 aaKnown RBP17.52■□□□□ 0.4
CKS1B-202ENST00000368436 KCND2Q9NZV8 630 aa17.52■□□□□ 0.4
CKS1B-202ENST00000368436 H7C4K7 107 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 GLULP15104 373 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 ATF2P15336 505 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 PTPN2P17706 415 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 SMTNP53814 917 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 SLC5A9Q2M3M2 681 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 SPECC1Q5M775 1068 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 ARL6IP4Q66PJ3 421 aaKnown RBP17.51■□□□□ 0.39
CKS1B-202ENST00000368436 MCTP1Q6DN14 999 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 POTEHQ6S545 545 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 TCEAL8Q8IYN2 117 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 KCNN1Q92952 543 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 SUSD3Q96L08 255 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 CFAP54Q96N23 3096 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 FOXQ1Q9C009 403 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 SEMA4AQ9H3S1 761 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 MRPS23Q9Y3D9 190 aaKnown RBP17.51■□□□□ 0.39
CKS1B-202ENST00000368436 COL4A3Q01955 1670 aa17.51■□□□□ 0.39
CKS1B-202ENST00000368436 PATJQ8NI35 1801 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 KANSL1LA0AUZ9 987 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 RHOP08100 348 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 HARSP12081 509 aaKnown RBP17.5■□□□□ 0.39
CKS1B-202ENST00000368436 ELF1P32519 619 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 PRKCQQ04759 706 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 MCL1Q07820 350 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 RAD51AP2Q09MP3 1159 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 SNW1Q13573 536 aaKnown RBP17.5■□□□□ 0.39
CKS1B-202ENST00000368436 NOLC1Q14978 699 aaKnown RBP eCLIP17.5■□□□□ 0.39
CKS1B-202ENST00000368436 ZRSR1Q15695 479 aaKnown RBP17.5■□□□□ 0.39
CKS1B-202ENST00000368436 TMEM119Q4V9L6 283 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 SLC44A4Q53GD3 710 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 ADSSL1Q8N142 457 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 ING5Q8WYH8 240 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 TMX3Q96JJ7 454 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 KXD1Q9BQD3 176 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 GDE1Q9NZC3 331 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 FBXL5Q9UKA1 691 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 NUB1Q9Y5A7 615 aa17.5■□□□□ 0.39
CKS1B-202ENST00000368436 VWA3AA6NCI4 1184 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 PRRG1O14668 218 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 CLDN3O15551 220 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 ECI2O75521 394 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 SEC24AO95486 1093 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 LRG1P02750 347 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 PLA2G4BP0C869 781 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 PFKPQ01813 784 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 MLF2Q15773 248 aaPredicted RBP17.49■□□□□ 0.39
CKS1B-202ENST00000368436 SEZ6Q53EL9 994 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 ARSHQ5FYA8 562 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 PRSS36Q5K4E3 855 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 TPGS2Q68CL5 300 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 C1orf210Q8IVY1 113 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 MCRS1Q96EZ8 462 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 PLIN2Q99541 437 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 HAPLN2Q9GZV7 340 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 PLEKHA5Q9HAU0 1116 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 ANKFY1Q9P2R3 1169 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 CACNA1IQ9P0X4 2223 aa17.49■□□□□ 0.39
CKS1B-202ENST00000368436 SLC26A4O43511 780 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 LRRN2O75325 713 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 MICAL2O94851 1124 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 GJB2P29033 226 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 NCKAP1LP55160 1127 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 ARPP19P56211 112 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 ZBTB6Q15916 424 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 CTXN3Q4LDR2 81 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 DDX12PQ92771 950 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 AK8Q96MA6 479 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 TBC1D32Q96NH3 1257 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 OSBPL6Q9BZF3 934 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 PLA2G2FQ9BZM2 168 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 CYP4F11Q9HBI6 524 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms