RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 ATF7P17544 494 aaPredicted RBP13.77□□□□□ -0.21
LMX1A-203ENST00000367893 KCNA5P22460 613 aa13.77□□□□□ -0.21
LMX1A-203ENST00000367893 MTIF2P46199 727 aaKnown RBP13.77□□□□□ -0.21
LMX1A-203ENST00000367893 MRE11P49959 708 aa13.77□□□□□ -0.21
LMX1A-203ENST00000367893 VAMP7P51809 220 aa13.77□□□□□ -0.21
LMX1A-203ENST00000367893 COPB1P53618 953 aaKnown RBP13.77□□□□□ -0.21
LMX1A-203ENST00000367893 SURF1Q15526 300 aa13.77□□□□□ -0.21
LMX1A-203ENST00000367893 USP37Q86T82 979 aa13.77□□□□□ -0.21
LMX1A-203ENST00000367893 ECHDC2Q86YB7 292 aa13.77□□□□□ -0.21
LMX1A-203ENST00000367893 NPAS4Q8IUM7 802 aa13.77□□□□□ -0.21
LMX1A-203ENST00000367893 CD302Q8IX05 232 aa13.77□□□□□ -0.21
LMX1A-203ENST00000367893 KHSRPQ92945 711 aaKnown RBP eCLIP13.77□□□□□ -0.21
LMX1A-203ENST00000367893 TSPAN18Q96SJ8 248 aa13.77□□□□□ -0.21
LMX1A-203ENST00000367893 RNF39Q9H2S5 420 aa13.77□□□□□ -0.21
LMX1A-203ENST00000367893 ASB7Q9H672 318 aa13.77□□□□□ -0.21
LMX1A-203ENST00000367893 ELAC1Q9H777 363 aaKnown RBP13.77□□□□□ -0.21
LMX1A-203ENST00000367893 RPF1Q9H9Y2 349 aaKnown RBP13.77□□□□□ -0.21
LMX1A-203ENST00000367893 HES2Q9Y543 173 aa13.77□□□□□ -0.21
LMX1A-203ENST00000367893 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.77□□□□□ -0.21
LMX1A-203ENST00000367893 PMM2O15305 246 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 RECQL4O94761 1208 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 CXCL8P10145 99 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 PRKCSHP14314 528 aaPredicted RBP13.76□□□□□ -0.21
LMX1A-203ENST00000367893 GTF2H1P32780 548 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 OSTNP61366 133 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 DLG4P78352 724 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 CAMK1Q14012 370 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 BTG3Q14201 252 aaPredicted RBP13.76□□□□□ -0.21
LMX1A-203ENST00000367893 NR1I3Q14994 352 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 VWA3BQ502W6 1294 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 AGMOQ6ZNB7 445 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 HACE1Q8IYU2 909 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 SNX27Q96L92 541 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 NAP1L5Q96NT1 182 aaPredicted RBP13.76□□□□□ -0.21
LMX1A-203ENST00000367893 C11orf84Q9BUA3 381 aaPredicted RBP13.76□□□□□ -0.21
LMX1A-203ENST00000367893 NDST4Q9H3R1 872 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 NSUN3Q9H649 340 aaKnown RBP13.76□□□□□ -0.21
LMX1A-203ENST00000367893 PDE11AQ9HCR9 933 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 RTN4Q9NQC3 1192 aaKnown RBP13.76□□□□□ -0.21
LMX1A-203ENST00000367893 TAB2Q9NYJ8 693 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 CNTN3Q9P232 1028 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 GIT1Q9Y2X7 761 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 RWDD3Q9Y3V2 267 aa13.76□□□□□ -0.21
LMX1A-203ENST00000367893 MRPL42Q9Y6G3 142 aaKnown RBP13.76□□□□□ -0.21
LMX1A-203ENST00000367893 LRRIQ3A6PVS8 624 aaPredicted RBP13.75□□□□□ -0.21
LMX1A-203ENST00000367893 LGALS16A8MUM7 142 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 LACTBL1A8MY62 500 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 INPPL1O15357 1258 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 SERPINC1P01008 464 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 LTBRP36941 435 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 GATMP50440 423 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 UBASH3AP57075 661 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 KCNH2Q12809 1159 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 ZBTB6Q15916 424 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 CTC1Q2NKJ3 1217 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 C15orf39Q6ZRI6 1047 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 NT5DC4Q86YG4 428 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 CREBRFQ8IUR6 639 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 WDR49Q8IV35 697 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 CMTR2Q8IYT2 770 aaKnown RBP13.75□□□□□ -0.21
LMX1A-203ENST00000367893 ZNF516Q92618 1163 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 CCDC127Q96BQ5 260 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 PGBD4Q96DM1 585 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 PABPC5Q96DU9 382 aaKnown RBP13.75□□□□□ -0.21
LMX1A-203ENST00000367893 CGRRF1Q99675 332 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 PLVAPQ9BX97 442 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 LMAN2LQ9H0V9 348 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 VPS16Q9H269 839 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 EPHX3Q9H6B9 360 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 UBN1Q9NPG3 1134 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 TOPORSQ9NS56 1045 aaPredicted RBP13.75□□□□□ -0.21
LMX1A-203ENST00000367893 INTS13Q9NVM9 706 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 TMEM161AQ9NX61 479 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 DERAQ9Y315 318 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 C2CD2Q9Y426 696 aa13.75□□□□□ -0.21
LMX1A-203ENST00000367893 GRXCR2A6NFK2 248 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 MEIS3P2A8K0S8 358 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 TDRD15B5MCY1 1934 aaKnown RBP13.74□□□□□ -0.21
LMX1A-203ENST00000367893 H3BQ06 376 aaPredicted RBP13.74□□□□□ -0.21
LMX1A-203ENST00000367893 P4HA2O15460 535 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 STX10O60499 249 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 AFPP02771 609 aaKnown RBP13.74□□□□□ -0.21
LMX1A-203ENST00000367893 C4BPAP04003 597 aaKnown RBP13.74□□□□□ -0.21
LMX1A-203ENST00000367893 TRIM49P0CI25 452 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 TRIM49CP0CI26 452 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 ITGA4P13612 1032 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 IL9P15248 144 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 KCNE1P15382 129 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 COL9A1P20849 921 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 AKAP5P24588 427 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 DNAJB1P25685 340 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 FMO5P49326 533 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 AP3M2P53677 418 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 YARSP54577 528 aaKnown RBP13.74□□□□□ -0.21
LMX1A-203ENST00000367893 PPP3CAQ08209 521 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 HYAL1Q12794 435 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 PTPRJQ12913 1337 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 EFCAB13Q8IY85 973 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 GSTCDQ8NEC7 633 aa13.74□□□□□ -0.21
LMX1A-203ENST00000367893 FNBP1Q96RU3 617 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms