RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 PLCD1P51178 756 aa9.17□□□□□ -0.94
YBX3-204ENST00000366290 IL2P60568 153 aa9.17□□□□□ -0.94
YBX3-204ENST00000366290 JAG1P78504 1218 aa9.17□□□□□ -0.94
YBX3-204ENST00000366290 STAT4Q14765 748 aa9.17□□□□□ -0.94
YBX3-204ENST00000366290 NR1I3Q14994 352 aa9.17□□□□□ -0.94
YBX3-204ENST00000366290 FIGNQ5HY92 759 aa9.17□□□□□ -0.94
YBX3-204ENST00000366290 EP400NLQ6ZTU2 488 aa9.17□□□□□ -0.94
YBX3-204ENST00000366290 LCORLQ8N3X6 602 aa9.17□□□□□ -0.94
YBX3-204ENST00000366290 PARK7Q99497 189 aaKnown RBP9.17□□□□□ -0.94
YBX3-204ENST00000366290 SLC6A17Q9H1V8 727 aa9.17□□□□□ -0.94
YBX3-204ENST00000366290 THG1LQ9NWX6 298 aaKnown RBP9.17□□□□□ -0.94
YBX3-204ENST00000366290 MYOTQ9UBF9 498 aa9.17□□□□□ -0.94
YBX3-204ENST00000366290 SAP30BPQ9UHR5 308 aaKnown RBP9.17□□□□□ -0.94
YBX3-204ENST00000366290 ZBTB21Q9ULJ3 1066 aa9.17□□□□□ -0.94
YBX3-204ENST00000366290 MYH8P13535 1937 aa9.17□□□□□ -0.94
YBX3-204ENST00000366290 DOCK3Q8IZD9 2030 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 RANBP2P49792 3224 aaKnown RBP9.16□□□□□ -0.94
YBX3-204ENST00000366290 TRIM75PA6NK02 468 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 ZEB2O60315 1214 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 KRT37O76014 449 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 MBD4O95243 580 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 SHMT1P34896 483 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 ID4P47928 161 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 BACE1P56817 501 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 SPP2Q13103 211 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 LCE3BQ5TA77 95 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 FSTL4Q6MZW2 842 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 LHFPL2Q6ZUX7 228 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 KRTAP1-3Q8IUG1 177 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 NOSTRINQ8IVI9 506 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 RBM12BQ8IXT5 1001 aaKnown RBP9.16□□□□□ -0.94
YBX3-204ENST00000366290 PHOSPHO1Q8TCT1 267 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 SDR42E1Q8WUS8 393 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 CHTF18Q8WVB6 975 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 EVI5LQ96CN4 794 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 PUS7LQ9H0K6 701 aaKnown RBP9.16□□□□□ -0.94
YBX3-204ENST00000366290 ARMT1Q9H993 441 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 AS3MTQ9HBK9 375 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 MCM9Q9NXL9 1143 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 DDX56Q9NY93 547 aaKnown RBP9.16□□□□□ -0.94
YBX3-204ENST00000366290 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.16□□□□□ -0.94
YBX3-204ENST00000366290 DBR1Q9UK59 544 aaKnown RBP9.16□□□□□ -0.94
YBX3-204ENST00000366290 AGTPBP1Q9UPW5 1226 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 NUB1Q9Y5A7 615 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 PCDHB4Q9Y5E5 795 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 MGAMO43451 1857 aa9.16□□□□□ -0.94
YBX3-204ENST00000366290 C19orf81C9J6K1 198 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 RNF113AO15541 343 aaKnown RBP9.15□□□□□ -0.94
YBX3-204ENST00000366290 FKBP9O95302 570 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 HOXA7P31268 230 aaPredicted RBP9.15□□□□□ -0.94
YBX3-204ENST00000366290 LSSP48449 732 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 IRF9Q00978 393 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 RAB3GAP1Q15042 981 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 ARHGEF6Q15052 776 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 C12orf60Q5U649 245 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 CREB3L3Q68CJ9 461 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 RPTNQ6XPR3 784 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 KCTD1Q719H9 257 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 FKBP9P1Q75LS8 142 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 MILR1Q7Z6M3 343 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 ZSWIM9Q86XI8 627 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 NLGN4XQ8N0W4 816 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 STRBPQ96SI9 672 aaKnown RBP9.15□□□□□ -0.94
YBX3-204ENST00000366290 HOMER2Q9NSB8 354 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 ASH2LQ9UBL3 628 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 SWAP70Q9UH65 585 aa9.15□□□□□ -0.94
YBX3-204ENST00000366290 APOBEC2Q9Y235 224 aaKnown RBP9.15□□□□□ -0.94
YBX3-204ENST00000366290 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.15□□□□□ -0.94
YBX3-204ENST00000366290 ZSWIM8A7E2V4 1837 aa9.15□□□□□ -0.95
YBX3-204ENST00000366290 GREB1LQ9C091 1923 aaPredicted RBP9.14□□□□□ -0.95
YBX3-204ENST00000366290 OR14I1A6ND48 311 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 BIN1O00499 593 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 GPR39O43194 453 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 PRKAB2O43741 272 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 GH2P01242 217 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 GLI1P08151 1106 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 CYP2C8P10632 490 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 PMLP29590 882 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 KPNA1P52294 538 aaPredicted RBP9.14□□□□□ -0.95
YBX3-204ENST00000366290 HMGCS2P54868 508 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 PRMT2P55345 433 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 OCRLQ01968 901 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 TUSC3Q13454 348 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 KCNMB1Q16558 191 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 SHROOM1Q2M3G4 852 aaPredicted RBP9.14□□□□□ -0.95
YBX3-204ENST00000366290 CERKLQ49MI3 558 aaPredicted RBP9.14□□□□□ -0.95
YBX3-204ENST00000366290 SBK1Q52WX2 424 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 BMP2KLQ5H9B9 411 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 TREML2Q5T2D2 321 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 RNF219Q5W0B1 726 aaPredicted RBP9.14□□□□□ -0.95
YBX3-204ENST00000366290 OGFOD2Q6N063 350 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 STAG1Q8WVM7 1258 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 ZNF333Q96JL9 665 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 C12orf42Q96LP6 360 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 FSD1Q9BTV5 496 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 OXSMQ9NWU1 459 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 H2AFY2Q9P0M6 372 aaPredicted RBP9.14□□□□□ -0.95
YBX3-204ENST00000366290 TELO2Q9Y4R8 837 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 ATP23Q9Y6H3 246 aa9.14□□□□□ -0.95
YBX3-204ENST00000366290 CEP290O15078 2479 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms