RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 NUDCD1Q96RS6 583 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 THAP2Q9H0W7 228 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 LRRC19Q9H756 370 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 DCLRE1BQ9H816 532 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 PARP14Q460N5 1801 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 POTEB3A0JP26 581 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 POTECB2RU33 542 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 CDH16O75309 829 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 TTC4O95801 387 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 CIITAP33076 1130 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 NR1H3Q13133 447 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 DRAP1Q14919 205 aaPredicted RBP20.27■□□□□ 0.84
CMTM3-201ENST00000361909 ZRSR2Q15696 482 aaKnown RBP20.27■□□□□ 0.84
CMTM3-201ENST00000361909 POTEBQ6S5H4 581 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 CEP128Q6ZU80 1094 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 SLC13A5Q86YT5 568 aaPredicted RBP20.27■□□□□ 0.84
CMTM3-201ENST00000361909 SLFN12Q8IYM2 578 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 ANKRD35Q8N283 1001 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 KCTD17Q8N5Z5 321 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 BORCS6Q96GS4 357 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 LRRC37BQ96QE4 947 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 P2RX7Q99572 595 aaKnown RBP20.27■□□□□ 0.84
CMTM3-201ENST00000361909 PITPNM3Q9BZ71 974 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.27■□□□□ 0.84
CMTM3-201ENST00000361909 MAP3K20Q9NYL2 800 aaKnown RBP20.27■□□□□ 0.84
CMTM3-201ENST00000361909 TMOD4Q9NZQ9 345 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 STOML1Q9UBI4 398 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 NKX1-2Q9UD57 310 aaPredicted RBP20.27■□□□□ 0.84
CMTM3-201ENST00000361909 DNAJC12Q9UKB3 198 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 CCPG1Q9ULG6 757 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 CSADQ9Y600 493 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 SNCAIPQ9Y6H5 919 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 WDR90Q96KV7 1748 aa20.27■□□□□ 0.84
CMTM3-201ENST00000361909 NPHP3-ACAD11A0A0J9YXS1 232 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 TAC1P20366 129 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 PSMC2P35998 433 aaKnown RBP20.27■□□□□ 0.83
CMTM3-201ENST00000361909 CASP5P51878 434 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 SLC18A1P54219 525 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 GHRHRQ02643 423 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 VGLL4Q14135 290 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 GIT2Q14161 759 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 RHBDF2Q6PJF5 856 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 OTUD6AQ7L8S5 288 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 FAM13CQ8NE31 585 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 ERMNQ8TAM6 284 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 BICD1Q96G01 975 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 PLVAPQ9BX97 442 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 MYLK2Q9H1R3 596 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 TLE6Q9H808 572 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 UBN1Q9NPG3 1134 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 COG5Q9UP83 839 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 USP20Q9Y2K6 914 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 LRCH1Q9Y2L9 728 aa20.27■□□□□ 0.83
CMTM3-201ENST00000361909 ZBED4O75132 1171 aa20.26■□□□□ 0.83
CMTM3-201ENST00000361909 HOXD13P35453 343 aa20.26■□□□□ 0.83
CMTM3-201ENST00000361909 HMGCS2P54868 508 aa20.26■□□□□ 0.83
CMTM3-201ENST00000361909 DGKZQ13574 1117 aa20.26■□□□□ 0.83
CMTM3-201ENST00000361909 Q4G0T1 1027 aa20.26■□□□□ 0.83
CMTM3-201ENST00000361909 UBAP2Q5T6F2 1119 aaKnown RBP20.26■□□□□ 0.83
CMTM3-201ENST00000361909 SFR1Q86XK3 245 aa20.26■□□□□ 0.83
CMTM3-201ENST00000361909 SYT2Q8N9I0 419 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-201ENST00000361909 ZHX3Q9H4I2 956 aa20.26■□□□□ 0.83
CMTM3-201ENST00000361909 EHMT1Q9H9B1 1298 aa20.26■□□□□ 0.83
CMTM3-201ENST00000361909 TBX3O15119 743 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 EIF3DO15371 548 aaKnown RBP eCLIP20.25■□□□□ 0.83
CMTM3-201ENST00000361909 CFBP00751 764 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 GJB7Q6PEY0 223 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 SESTD1Q86VW0 696 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 CCDC25Q86WR0 208 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 MCF2L2Q86YR7 1114 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 DTNBP1Q96EV8 351 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 CDCA5Q96FF9 252 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 CCDC77Q9BR77 488 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 WDR35Q9P2L0 1181 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 ADAMTS5Q9UNA0 930 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 GAP43P17677 238 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 HOXA13P31271 388 aaPredicted RBP20.25■□□□□ 0.83
CMTM3-201ENST00000361909 CACNB1Q02641 598 aaPredicted RBP20.25■□□□□ 0.83
CMTM3-201ENST00000361909 PRKG1Q13976 671 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 GDAP1Q8TB36 358 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 MAIP1Q8WWC4 291 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 ERP27Q96DN0 273 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 SNF8Q96H20 258 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 AGBL1Q96MI9 1066 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 APEX2Q9UBZ4 518 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 UBE4BO95155 1302 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 MYPNQ86TC9 1320 aa20.25■□□□□ 0.83
CMTM3-201ENST00000361909 VWA5AO00534 786 aa20.24■□□□□ 0.83
CMTM3-201ENST00000361909 FMO5P49326 533 aa20.24■□□□□ 0.83
CMTM3-201ENST00000361909 HSD17B4P51659 736 aa20.24■□□□□ 0.83
CMTM3-201ENST00000361909 OAZ1P54368 228 aa20.24■□□□□ 0.83
CMTM3-201ENST00000361909 DYNC1I2Q13409 638 aaKnown RBP20.24■□□□□ 0.83
CMTM3-201ENST00000361909 STAT4Q14765 748 aa20.24■□□□□ 0.83
CMTM3-201ENST00000361909 GNPTABQ3T906 1256 aa20.24■□□□□ 0.83
CMTM3-201ENST00000361909 SAMD1Q6SPF0 538 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-201ENST00000361909 FAM186BQ8IYM0 893 aa20.24■□□□□ 0.83
CMTM3-201ENST00000361909 DRAXINQ8NBI3 349 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-201ENST00000361909 CD101Q93033 1021 aa20.24■□□□□ 0.83
CMTM3-201ENST00000361909 DDX23Q9BUQ8 820 aaKnown RBP20.24■□□□□ 0.83
CMTM3-201ENST00000361909 GPR88Q9GZN0 384 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms