RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 EXOC3L4Q17RC7 722 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 TAS1R2Q8TE23 839 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 RSPH1Q8WYR4 309 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 ANP32BQ92688 251 aaKnown RBP18.32■□□□□ 0.52
LMNA-202ENST00000361308 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.32■□□□□ 0.52
LMNA-202ENST00000361308 MICAL3Q7RTP6 2002 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 LTBP2Q14767 1821 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 DGKIO75912 1065 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 CST3P01034 146 aaPredicted RBP18.32■□□□□ 0.52
LMNA-202ENST00000361308 RNASELQ05823 741 aaKnown RBP18.32■□□□□ 0.52
LMNA-202ENST00000361308 C1orf127Q8N9H9 656 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 MRFAP1L1Q96HT8 127 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 PCMTD1Q96MG8 357 aaPredicted RBP18.32■□□□□ 0.52
LMNA-202ENST00000361308 CASD1Q96PB1 797 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 ERGIC2Q96RQ1 377 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 RAB20Q9NX57 234 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 CXXC1Q9P0U4 656 aaPredicted RBP18.32■□□□□ 0.52
LMNA-202ENST00000361308 TUBGCP4Q9UGJ1 667 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 ITGA11Q9UKX5 1188 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 COQ4Q9Y3A0 265 aa18.32■□□□□ 0.52
LMNA-202ENST00000361308 TBKBP1A7MCY6 615 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 ITGB3P05106 788 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 GATMP50440 423 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 GUCY2FP51841 1108 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 KCNMA1Q12791 1236 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 NCOA4Q13772 614 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 SYCP1Q15431 976 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 PTPN21Q16825 1174 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 FAM117BQ6P1L5 589 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 TMCO2Q7Z6W1 182 aaPredicted RBP18.31■□□□□ 0.52
LMNA-202ENST00000361308 EHBP1Q8NDI1 1231 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 FAM193BQ96PV7 902 aaPredicted RBP18.31■□□□□ 0.52
LMNA-202ENST00000361308 MRPL9Q9BYD2 267 aaKnown RBP18.31■□□□□ 0.52
LMNA-202ENST00000361308 TBC1D13Q9NVG8 400 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 GCNT4Q9P109 453 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 SLC4A7Q9Y6M7 1214 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 ANK1P16157 1881 aa18.31■□□□□ 0.52
LMNA-202ENST00000361308 A0A1W2PQC6 194 aa18.3■□□□□ 0.52
LMNA-202ENST00000361308 HLA-DRAP01903 254 aa18.3■□□□□ 0.52
LMNA-202ENST00000361308 PIK3CAP42336 1068 aa18.3■□□□□ 0.52
LMNA-202ENST00000361308 RGS19P49795 217 aa18.3■□□□□ 0.52
LMNA-202ENST00000361308 RBP5P82980 135 aa18.3■□□□□ 0.52
LMNA-202ENST00000361308 SOX4Q06945 474 aaPredicted RBP18.3■□□□□ 0.52
LMNA-202ENST00000361308 NAB2Q15742 525 aa18.3■□□□□ 0.52
LMNA-202ENST00000361308 EPC2Q52LR7 807 aa18.3■□□□□ 0.52
LMNA-202ENST00000361308 CCDC150Q8NCX0 1101 aa18.3■□□□□ 0.52
LMNA-202ENST00000361308 AGAP1Q9UPQ3 857 aa18.3■□□□□ 0.52
LMNA-202ENST00000361308 TRIP11Q15643 1979 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 VNN1O95497 513 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 SLC9A1P19634 815 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 PON1P27169 355 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 POLR2BP30876 1174 aaKnown RBP18.29■□□□□ 0.52
LMNA-202ENST00000361308 TUSC3Q13454 348 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 SGSM1Q2NKQ1 1148 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 WDR44Q5JSH3 913 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 PHOSPHO2Q8TCD6 241 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 SEMA4DQ92854 862 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 IMPG2Q9BZV3 1241 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 GOLGA2P5Q9HBQ8 144 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 SIX4Q9UIU6 781 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 CAPN15O75808 1086 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 CLSTN1O94985 981 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 LRPAP1P30533 357 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 MYL6P60660 151 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 C9orf57Q5W0N0 161 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 SCARA3Q6AZY7 606 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 TRIM65Q6PJ69 517 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 ZNF280BQ86YH2 543 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 TMEM130Q8N3G9 435 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 LMO3Q8TAP4 145 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 CXorf38Q8TB03 319 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 SLC9A7Q96T83 725 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 ZBED2Q9BTP6 218 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 SIK3Q9Y2K2 1263 aa18.29■□□□□ 0.52
LMNA-202ENST00000361308 RALGAPA2Q2PPJ7 1873 aa18.28■□□□□ 0.52
LMNA-202ENST00000361308 CASTOR2A6NHX0 329 aa18.28■□□□□ 0.52
LMNA-202ENST00000361308 H0YGN5 161 aa18.28■□□□□ 0.52
LMNA-202ENST00000361308 LRRN2O75325 713 aa18.28■□□□□ 0.52
LMNA-202ENST00000361308 DDHD2O94830 711 aa18.28■□□□□ 0.52
LMNA-202ENST00000361308 GJB5O95377 273 aa18.28■□□□□ 0.52
LMNA-202ENST00000361308 RPL9P32969 192 aaKnown RBP18.28■□□□□ 0.52
LMNA-202ENST00000361308 PBX1P40424 430 aa18.28■□□□□ 0.52
LMNA-202ENST00000361308 KLK7P49862 253 aa18.28■□□□□ 0.52
LMNA-202ENST00000361308 PAN2Q504Q3 1202 aaKnown RBP18.28■□□□□ 0.52
LMNA-202ENST00000361308 LRRC43Q8N309 656 aa18.28■□□□□ 0.52
LMNA-202ENST00000361308 ZNF689Q96CS4 500 aaPredicted RBP18.28■□□□□ 0.52
LMNA-202ENST00000361308 DDX27Q96GQ7 796 aaKnown RBP18.28■□□□□ 0.52
LMNA-202ENST00000361308 YME1L1Q96TA2 773 aa18.28■□□□□ 0.52
LMNA-202ENST00000361308 PI4K2AQ9BTU6 479 aa18.28■□□□□ 0.52
LMNA-202ENST00000361308 INTS2Q9H0H0 1204 aaKnown RBP18.28■□□□□ 0.52
LMNA-202ENST00000361308 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.28■□□□□ 0.522e-7■■■■■ 56.7
LMNA-202ENST00000361308 ANO9A1A5B4 782 aa18.27■□□□□ 0.52
LMNA-202ENST00000361308 PIRO00625 290 aa18.27■□□□□ 0.52
LMNA-202ENST00000361308 ZC3H11AO75152 810 aaKnown RBP eCLIP18.27■□□□□ 0.52
LMNA-202ENST00000361308 ATP2A2P16615 1042 aaKnown RBP18.27■□□□□ 0.52
LMNA-202ENST00000361308 ATICP31939 592 aa18.27■□□□□ 0.52
LMNA-202ENST00000361308 CLCNKBP51801 687 aa18.27■□□□□ 0.52
LMNA-202ENST00000361308 LRMPQ12912 555 aa18.27■□□□□ 0.52
LMNA-202ENST00000361308 MYO1EQ12965 1108 aa18.27■□□□□ 0.52
LMNA-202ENST00000361308 SPECC1LQ69YQ0 1117 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms