RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 KRT35Q92764 455 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 SYNCRIPO60506 623 aaKnown RBP9.74□□□□□ -0.85
VPS13A-203ENST00000360280 KYNUQ16719 465 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 PDZK1Q5T2W1 519 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 MOSPD2Q8NHP6 518 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 SERPINB13Q9UIV8 391 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 BMP3P12645 472 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 PPP3CCP48454 512 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 GTF2H3Q13889 308 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 KIZQ2M2Z5 673 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 URGCPQ8TCY9 931 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 FAM153AQ9UHL3 310 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 PHKG1Q16816 387 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 FAM102AQ5T9C2 384 aaPredicted RBP9.74□□□□□ -0.85
VPS13A-203ENST00000360280 CEP44Q9C0F1 390 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 VPS33BQ9H267 617 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 ARHGEF38Q9NXL2 777 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 ACCSLQ4AC99 568 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 ARMC4Q5T2S8 1044 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 BEST2Q8NFU1 509 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 MYH7P12883 1935 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 CHN1P15882 459 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 CDH6P55285 790 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 ZNF544Q6NX49 715 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 FAM9CQ8IZT9 166 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 RMND5BQ96G75 393 aaPredicted RBP9.74□□□□□ -0.85
VPS13A-203ENST00000360280 AP1S2P56377 157 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 WDR48Q8TAF3 677 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 WNK4Q96J92 1243 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 PNMA6FA0A0J9YX94 578 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 SUPT3HB4E1H0 165 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 KRT6AP02538 564 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 IFNAR1P17181 557 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 LSP1P33241 339 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 SEPT1Q8WYJ6 367 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 ECSITQ9BQ95 431 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 ATAD3AQ9NVI7 634 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 COPAP53621 1224 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 AP3B2Q13367 1082 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 KRT74Q7RTS7 529 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 DNAJC7Q99615 494 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 CACNA2D2Q9NY47 1150 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 RTN2O75298 545 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 GPC3P51654 580 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 ZNF568Q3ZCX4 644 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 SPICE1Q8N0Z3 855 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 C3orf20Q8ND61 904 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 CHMP2BQ9UQN3 213 aa9.74□□□□□ -0.85
VPS13A-203ENST00000360280 CIAO1O76071 339 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 CYP19A1P11511 503 aaPredicted RBP9.73□□□□□ -0.85
VPS13A-203ENST00000360280 ZMYM1Q5SVZ6 1142 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 ZNF786Q8N393 782 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 TINF2Q9BSI4 451 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 VPS9D1Q9Y2B5 631 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 CDC42BPBQ9Y5S2 1711 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 ESYT3A0FGR9 886 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 TRPC5OSA6NMA1 111 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 RGS4P49798 205 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 PEX5P50542 639 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 NME3Q13232 169 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 KLHL4Q9C0H6 718 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.73□□□□□ -0.85
VPS13A-203ENST00000360280 TTC37Q6PGP7 1564 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 SOAT1P35610 550 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 RPS6P62753 249 aaKnown RBP9.73□□□□□ -0.85
VPS13A-203ENST00000360280 KIAA0825Q8IV33 1275 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 MAGED4Q96JG8 741 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 GPATCH8Q9UKJ3 1502 aaKnown RBP9.73□□□□□ -0.85
VPS13A-203ENST00000360280 A0A1W2PQC6 194 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 ANXA11P50995 505 aaKnown RBP9.73□□□□□ -0.85
VPS13A-203ENST00000360280 MAPK6Q16659 721 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 TCP10L2B9ZVM9 353 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 RRM2P31350 389 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 EIF3EP60228 445 aaKnown RBP9.73□□□□□ -0.85
VPS13A-203ENST00000360280 UBXN2AP68543 259 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 STX5Q13190 355 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 TTC30AQ86WT1 665 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 TASP1Q9H6P5 420 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 CSE1LP55060 971 aaKnown RBP9.73□□□□□ -0.85
VPS13A-203ENST00000360280 TMC4Q7Z404 712 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 FAR2Q96K12 515 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 APOL4Q9BPW4 351 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 SENP7Q9BQF6 1050 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 MAP3K19Q56UN5 1328 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 SMAPO00193 183 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 AKAP5P24588 427 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 AP3M2P53677 418 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 PEX3P56589 373 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 LCORLQ8N3X6 602 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 ATL2Q8NHH9 583 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 ZNF804BA4D1E1 1349 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 APRTP07741 180 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 KYAT1Q16773 422 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 C12orf60Q5U649 245 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 DHX36Q9H2U1 1008 aaKnown RBP9.73□□□□□ -0.85
VPS13A-203ENST00000360280 CAAP1Q9H8G2 361 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 PALD1Q9ULE6 856 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 FCGR1AP12314 374 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 SYDE2Q5VT97 1194 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 MAP4K1Q92918 833 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms