RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 TDP2O95551 362 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 ACOT2P49753 483 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 RNPC3Q96LT9 517 aaKnown RBP13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 PP2D1A8MPX8 630 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 SUPT3HB4E1H0 165 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 HSPA9P38646 679 aaKnown RBP13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 CYTH1Q15438 398 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 C11orf96Q7Z7L8 435 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 CYGBQ8WWM9 190 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 CPA5Q8WXQ8 436 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 PLEKHA8Q96JA3 519 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 PSD3Q9NYI0 1048 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 CD274Q9NZQ7 290 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 NFKBIL1Q9UBC1 381 aaPredicted RBP13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 MAGI2Q86UL8 1455 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 NPHP3-ACAD11A0A0J9YXS1 232 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 PSMD3O43242 534 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 RGS7P49802 495 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 RAD23BP54727 409 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 MTHFD1LQ6UB35 978 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 SPATA16Q9BXB7 569 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 GOLPH3LQ9H4A5 285 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 TUFT1Q9NNX1 390 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 CACNA2D2Q9NY47 1150 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 CHUKO15111 745 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 C6orf222P0C671 652 aaPredicted RBP13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 CYP2C19P33261 490 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 MAGEA9P43362 315 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 RAB6BQ9NRW1 208 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 AGAP1Q9UPQ3 857 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 ATP11BQ9Y2G3 1177 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 COPG1Q9Y678 874 aaKnown RBP13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 TRPC1P48995 793 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 P3H1Q32P28 736 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 IER5Q5VY09 327 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 PLD3Q8IV08 490 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 SHCBP1Q8NEM2 672 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 MCEEQ96PE7 176 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 NPHS2Q9NP85 383 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 NCAPD2Q15021 1401 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 CDC27P30260 824 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 LAMB3Q13751 1172 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 CENPPQ6IPU0 288 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 FAM117BQ6P1L5 589 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 AGPAT1Q99943 283 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 SNX9Q9Y5X1 595 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 EIF4E1BA6NMX2 242 aaKnown RBP13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 FDX1P10109 184 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 TCF3P15923 654 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 CDC42EP1Q00587 391 aa13.37□□□□□ -0.27
LDLRAD4-201ENST00000359446 ANO9A1A5B4 782 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 KDM1AO60341 852 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 CDH2P19022 906 aaPredicted RBP13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 PGM1P36871 562 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 SLC1A1P43005 524 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 RCOR2Q8IZ40 523 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 SENP7Q9BQF6 1050 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 FAM129AQ9BZQ8 928 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 WWP1Q9H0M0 922 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 USE1Q9NZ43 259 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 DTNAQ9Y4J8 743 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 PTRHD1Q6GMV3 140 aaKnown RBP13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 KIAA2013Q8IYS2 634 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 GRAMD1AQ96CP6 724 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 OLFM3Q96PB7 478 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 BRD8Q9H0E9 1235 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 ELP3Q9H9T3 547 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 AMACRQ9UHK6 382 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 AKAP10O43572 662 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 TMEM143Q96AN5 459 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 CCDC142Q17RM4 750 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 CEP55Q53EZ4 464 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 ADCK1Q86TW2 530 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 LDHDQ86WU2 507 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 YIPF3Q9GZM5 350 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 SOAT1P35610 550 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 RBP5P82980 135 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 KIF2CQ99661 725 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 C17orf80Q9BSJ5 609 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 OSBPL1AQ9BXW6 950 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 PCDHB7Q9Y5E2 793 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 POLRMTO00411 1230 aaKnown RBP13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 S100A5P33763 92 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 ALDH1A3P47895 512 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 SNX17Q15036 470 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 FAM167BQ9BTA0 163 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 SLC30A1Q9Y6M5 507 aa13.36□□□□□ -0.27
LDLRAD4-201ENST00000359446 TTC26A0AVF1 554 aa13.35□□□□□ -0.27
LDLRAD4-201ENST00000359446 DDHD2O94830 711 aa13.35□□□□□ -0.27
LDLRAD4-201ENST00000359446 FKBP9O95302 570 aa13.35□□□□□ -0.27
LDLRAD4-201ENST00000359446 ENO3P13929 434 aaPredicted RBP13.35□□□□□ -0.27
LDLRAD4-201ENST00000359446 ERFP50548 548 aa13.35□□□□□ -0.27
LDLRAD4-201ENST00000359446 NCOA4Q13772 614 aa13.35□□□□□ -0.27
LDLRAD4-201ENST00000359446 BTNL9Q6UXG8 535 aa13.35□□□□□ -0.27
LDLRAD4-201ENST00000359446 FKBP9P1Q75LS8 142 aa13.35□□□□□ -0.27
LDLRAD4-201ENST00000359446 USP33Q8TEY7 942 aa13.35□□□□□ -0.27
LDLRAD4-201ENST00000359446 HES6Q96HZ4 224 aa13.35□□□□□ -0.27
LDLRAD4-201ENST00000359446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.35□□□□□ -0.27
LDLRAD4-201ENST00000359446 RSPH10B2B2RC85 870 aa13.35□□□□□ -0.27
LDLRAD4-201ENST00000359446 RSPH10BP0C881 870 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms