RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 CDKAL1Q5VV42 579 aa11.93□□□□□ -0.5
PSEN1-202ENST00000357710 RBM44Q6ZP01 1051 aaKnown RBP11.93□□□□□ -0.5
PSEN1-202ENST00000357710 CPSF7Q8N684 471 aaKnown RBP11.93□□□□□ -0.5
PSEN1-202ENST00000357710 BORCS5Q969J3 196 aa11.93□□□□□ -0.5
PSEN1-202ENST00000357710 UROC1Q96N76 676 aa11.93□□□□□ -0.5
PSEN1-202ENST00000357710 AIFM3Q96NN9 605 aa11.93□□□□□ -0.5
PSEN1-202ENST00000357710 NUP88Q99567 741 aaPredicted RBP11.93□□□□□ -0.5
PSEN1-202ENST00000357710 CNNM2Q9H8M5 875 aa11.93□□□□□ -0.5
PSEN1-202ENST00000357710 DDX56Q9NY93 547 aaKnown RBP11.93□□□□□ -0.5
PSEN1-202ENST00000357710 MAP3K20Q9NYL2 800 aaKnown RBP11.93□□□□□ -0.5
PSEN1-202ENST00000357710 TRIM33Q9UPN9 1127 aa11.93□□□□□ -0.5
PSEN1-202ENST00000357710 A0A0B4J203 849 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 KLHL2O95198 593 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 SLC1A1P43005 524 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 CHRNEQ04844 493 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 ANO4Q32M45 955 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 C4orf46Q504U0 113 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 ZNF746Q6NUN9 644 aaPredicted RBP11.92□□□□□ -0.5
PSEN1-202ENST00000357710 FIP1L1Q6UN15 594 aaKnown RBP11.92□□□□□ -0.5
PSEN1-202ENST00000357710 DDI1Q8WTU0 396 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 ZC3H15Q8WU90 426 aaKnown RBP11.92□□□□□ -0.5
PSEN1-202ENST00000357710 GLMNQ92990 594 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 CCDC138Q96M89 665 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 DNAJC7Q99615 494 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 TBC1D10AQ9BXI6 508 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 OSBPL6Q9BZF3 934 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 RBM12Q9NTZ6 932 aaKnown RBP11.92□□□□□ -0.5
PSEN1-202ENST00000357710 RABGEF1Q9UJ41 708 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 MKL2Q9ULH7 1088 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 CFL2Q9Y281 166 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 RBM8AQ9Y5S9 174 aaKnown RBP11.92□□□□□ -0.5
PSEN1-202ENST00000357710 COL4A1P02462 1669 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 RFX7Q2KHR2 1363 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 BHMG1C9JSJ3 638 aaPredicted RBP11.92□□□□□ -0.5
PSEN1-202ENST00000357710 CAPN9O14815 690 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 PPP6R2O75170 966 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 SLC5A1P13866 664 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 NUP107P57740 925 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
PSEN1-202ENST00000357710 TNIP1Q15025 636 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 TTC39AQ5SRH9 613 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 C4orf22Q6V702 233 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 DCDC5Q6ZRR9 648 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 ADSSL1Q8N142 457 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 CCDC24Q8N4L8 307 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 PAF1Q8N7H5 531 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 PDZD8Q8NEN9 1154 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 MAP4K1Q92918 833 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 DDX50Q9BQ39 737 aaKnown RBP11.92□□□□□ -0.5
PSEN1-202ENST00000357710 VPS16Q9H269 839 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 SERHL2Q9H4I8 314 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 MOV10Q9HCE1 1003 aaKnown RBP11.92□□□□□ -0.5
PSEN1-202ENST00000357710 CYLDQ9NQC7 956 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 HACD3Q9P035 362 aa11.92□□□□□ -0.5
PSEN1-202ENST00000357710 XPO7Q9UIA9 1087 aaKnown RBP11.92□□□□□ -0.5
PSEN1-202ENST00000357710 CCDC169A6NNP5 214 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 SLC22A1O15245 554 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 FYNP06241 537 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 HOXB1P14653 301 aaPredicted RBP11.91□□□□□ -0.5
PSEN1-202ENST00000357710 GLULP15104 373 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 KRT2P35908 639 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 PHKA2P46019 1235 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 ATP6V0D1P61421 351 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 GRIN1Q05586 938 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 PDE4DQ08499 809 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 MORC3Q14149 939 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 SPATA5Q8NB90 893 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 CHPT1Q8WUD6 406 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 CIB1Q99828 191 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 SELENOSQ9BQE4 189 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 TUBB6Q9BUF5 446 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 MRPS26Q9BYN8 205 aaKnown RBP11.91□□□□□ -0.5
PSEN1-202ENST00000357710 XAB2Q9HCS7 855 aaKnown RBP11.91□□□□□ -0.5
PSEN1-202ENST00000357710 ANGPTL3Q9Y5C1 460 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 PCDHGA11Q9Y5H2 935 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 TAF1P21675 1872 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 SMIM23A6NLE4 172 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 DCTN3O75935 186 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 ALAS1P13196 640 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 BTF3P20290 206 aaKnown RBP11.91□□□□□ -0.5
PSEN1-202ENST00000357710 PTPN4P29074 926 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 ASPHQ12797 758 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 PNOCQ13519 176 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 NAALADL2Q58DX5 795 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 CLVS1Q8IUQ0 354 aaPredicted RBP11.91□□□□□ -0.5
PSEN1-202ENST00000357710 EXD1Q8NHP7 514 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 PRPF31Q8WWY3 499 aaKnown RBP11.91□□□□□ -0.5
PSEN1-202ENST00000357710 ZNF75CPQ92670 426 aaPredicted RBP11.91□□□□□ -0.5
PSEN1-202ENST00000357710 FSD1Q9BTV5 496 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 DDX18Q9NVP1 670 aaKnown RBP11.91□□□□□ -0.5
PSEN1-202ENST00000357710 HMGXB4Q9UGU5 601 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 MAN1B1Q9UKM7 699 aa11.91□□□□□ -0.5
PSEN1-202ENST00000357710 SPDYE16A6NNV3 312 aaPredicted RBP11.9□□□□□ -0.5
PSEN1-202ENST00000357710 M0QX08 132 aa11.9□□□□□ -0.5
PSEN1-202ENST00000357710 GUCY1B2O75343 617 aa11.9□□□□□ -0.5
PSEN1-202ENST00000357710 CSTF2P33240 577 aaKnown RBP eCLIP11.9□□□□□ -0.5
PSEN1-202ENST00000357710 KPNA1P52294 538 aaPredicted RBP11.9□□□□□ -0.5
PSEN1-202ENST00000357710 PTH1RQ03431 593 aa11.9□□□□□ -0.5
PSEN1-202ENST00000357710 FMR1Q06787 632 aaKnown RBP eCLIP11.9□□□□□ -0.5
PSEN1-202ENST00000357710 CHRNDQ07001 517 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms