RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 RHOP08100 348 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 HARSP12081 509 aaKnown RBP11.19□□□□□ -0.62
LINC01560-201ENST00000357412 PLS3P13797 630 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 RFX1P22670 979 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 RPL9P32969 192 aaKnown RBP11.19□□□□□ -0.62
LINC01560-201ENST00000357412 SLC12A3P55017 1021 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 RABEP1Q15276 862 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 ZRSR1Q15695 479 aaKnown RBP11.19□□□□□ -0.62
LINC01560-201ENST00000357412 SLC5A9Q2M3M2 681 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 SLC10A6Q3KNW5 377 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 SPECC1Q5M775 1068 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 MTSS1LQ765P7 747 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 KCTD17Q8N5Z5 321 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 ZNF461Q8TAF7 563 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 DDX23Q9BUQ8 820 aaKnown RBP11.19□□□□□ -0.62
LINC01560-201ENST00000357412 FOXQ1Q9C009 403 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 AVENQ9NQS1 362 aaPredicted RBP11.19□□□□□ -0.62
LINC01560-201ENST00000357412 MRPS23Q9Y3D9 190 aaKnown RBP11.19□□□□□ -0.62
LINC01560-201ENST00000357412 GPR179Q6PRD1 2367 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 CFAP54Q96N23 3096 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 LRRN2O75325 713 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 PLA2G4BP0C869 781 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 MAPTP10636 758 aaKnown RBP11.18□□□□□ -0.62
LINC01560-201ENST00000357412 ATF2P15336 505 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 MCL1Q07820 350 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 RAD51AP2Q09MP3 1159 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 SNW1Q13573 536 aaKnown RBP11.18□□□□□ -0.62
LINC01560-201ENST00000357412 TMEM119Q4V9L6 283 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 SEZ6Q53EL9 994 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 SLC44A4Q53GD3 710 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 MCTP1Q6DN14 999 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 ZPBP2Q6X784 338 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 ADSSL1Q8N142 457 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 TMEM130Q8N3G9 435 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 PJA1Q8NG27 643 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 ING5Q8WYH8 240 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 KCNN1Q92952 543 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 TMX3Q96JJ7 454 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 PLIN2Q99541 437 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 HAPLN2Q9GZV7 340 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 KCNG1Q9UIX4 513 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 FBXL5Q9UKA1 691 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 NUB1Q9Y5A7 615 aa11.18□□□□□ -0.62
LINC01560-201ENST00000357412 NPHP3-ACAD11A0A0J9YXS1 232 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 VWA3AA6NCI4 1184 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 NRG2O14511 850 aaPredicted RBP11.17□□□□□ -0.62
LINC01560-201ENST00000357412 CD2BP2O95400 341 aaKnown RBP11.17□□□□□ -0.62
LINC01560-201ENST00000357412 SEC24AO95486 1093 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 SMTNP53814 917 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 ARPP19P56211 112 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 PRKCQQ04759 706 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 STRN3Q13033 797 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 NOLC1Q14978 699 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC01560-201ENST00000357412 MLF2Q15773 248 aaPredicted RBP11.17□□□□□ -0.62
LINC01560-201ENST00000357412 ARSHQ5FYA8 562 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 PRSS36Q5K4E3 855 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 ARL6IP4Q66PJ3 421 aaKnown RBP11.17□□□□□ -0.62
LINC01560-201ENST00000357412 C1orf210Q8IVY1 113 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 TCEAL8Q8IYN2 117 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 MAML2Q8IZL2 1156 aaPredicted RBP11.17□□□□□ -0.62
LINC01560-201ENST00000357412 MCRS1Q96EZ8 462 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 SHDQ96IW2 340 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 SUSD3Q96L08 255 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 KXD1Q9BQD3 176 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 CYP4F11Q9HBI6 524 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 GDE1Q9NZC3 331 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 KCND2Q9NZV8 630 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 ANKFY1Q9P2R3 1169 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 TUBGCP4Q9UGJ1 667 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 MTF2Q9Y483 593 aaPredicted RBP11.17□□□□□ -0.62
LINC01560-201ENST00000357412 KIF3AQ9Y496 699 aa11.17□□□□□ -0.62
LINC01560-201ENST00000357412 EP300Q09472 2414 aaPredicted RBP11.17□□□□□ -0.62
LINC01560-201ENST00000357412 FAM186AA6NE01 2351 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 KANSL1LA0AUZ9 987 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 H7C4K7 107 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 ECI2O75521 394 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 LRG1P02750 347 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 SP9P0CG40 484 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 CXCL8P10145 99 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 CEBPBP17676 345 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 PTPN2P17706 415 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 GJB2P29033 226 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 ELF1P32519 619 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 MCM4P33991 863 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 CCR2P41597 374 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 NCKAP1LP55160 1127 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 PLCB2Q00722 1185 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 PFKPQ01813 784 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 ZBTB6Q15916 424 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 CTXN3Q4LDR2 81 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 TANGO2Q6ICL3 276 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 APPL2Q8NEU8 664 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 LRRC15Q8TF66 581 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 DDX12PQ92771 950 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 TCEAL4Q96EI5 215 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 TBC1D32Q96NH3 1257 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 PLA2G2FQ9BZM2 168 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 SEMA4AQ9H3S1 761 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 PLEKHA5Q9HAU0 1116 aa11.16□□□□□ -0.62
LINC01560-201ENST00000357412 AFF4Q9UHB7 1163 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms