RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 GLB1LQ6UWU2 654 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 MFN1Q8IWA4 741 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 WDCPQ9H6R7 721 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 GGCXP38435 758 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 PFKFB3Q16875 520 aaPredicted RBP7.75□□□□□ -1.17
VPS13A-202ENST00000357409 DGKHQ86XP1 1220 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 DDX42Q86XP3 938 aaKnown RBP eCLIP7.75□□□□□ -1.17
VPS13A-202ENST00000357409 KLC2Q9H0B6 622 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 C20orf96Q9NUD7 363 aaPredicted RBP7.75□□□□□ -1.17
VPS13A-202ENST00000357409 NFKBIL1Q9UBC1 381 aaPredicted RBP7.75□□□□□ -1.17
VPS13A-202ENST00000357409 ARP10275 920 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 TPH1P17752 444 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 GLRBP48167 497 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 CEP128Q6ZU80 1094 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 RNF180Q86T96 592 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 CEP70Q8NHQ1 597 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 RIN3Q8TB24 985 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 CD274Q9NZQ7 290 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 MAP3K7O43318 606 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 FCGRTP55899 365 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 PPP1R26Q5T8A7 1209 aaPredicted RBP7.75□□□□□ -1.17
VPS13A-202ENST00000357409 DHX40Q8IX18 779 aaKnown RBP7.75□□□□□ -1.17
VPS13A-202ENST00000357409 RPRD1AQ96P16 312 aaPredicted RBP7.75□□□□□ -1.17
VPS13A-202ENST00000357409 SLFN14P0C7P3 912 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 AARSP49588 968 aaKnown RBP eCLIP7.75□□□□□ -1.17
VPS13A-202ENST00000357409 EPHB4P54760 987 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 SLC15A2Q16348 729 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 CRLF3Q8IUI8 442 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 OSBPL5Q9H0X9 879 aaPredicted RBP7.75□□□□□ -1.17
VPS13A-202ENST00000357409 ZNF518AQ6AHZ1 1483 aa7.75□□□□□ -1.17
VPS13A-202ENST00000357409 GOLGA8KD6RF30 607 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 H0YCG3 227 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 ABCB1P08183 1280 aaPredicted RBP7.74□□□□□ -1.17
VPS13A-202ENST00000357409 KLC3Q6P597 504 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 SEPT1Q8WYJ6 367 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 SYTL2Q9HCH5 934 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 RASGRF2O14827 1237 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 GH1P01241 217 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 NR3C2P08235 984 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 IFNAR1P17181 557 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 ALDH9A1P49189 494 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 C6orf10Q5SRN2 563 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 EPM2AIP1Q7L775 607 aaPredicted RBP7.74□□□□□ -1.17
VPS13A-202ENST00000357409 SP8Q8IXZ3 490 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 GALNT4Q8N4A0 578 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 TASP1Q9H6P5 420 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 A0A087WZ62 844 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 PGRMC1O00264 195 aaKnown RBP7.74□□□□□ -1.17
VPS13A-202ENST00000357409 TBX3O15119 743 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 NDUFS3O75489 264 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 DCTN3O75935 186 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 ALDH2P05091 517 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 BRAFP15056 766 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 MAGOHP61326 146 aaKnown RBP7.74□□□□□ -1.17
VPS13A-202ENST00000357409 FDXACB1Q9BRP7 624 aaPredicted RBP7.74□□□□□ -1.17
VPS13A-202ENST00000357409 TMEM247A6NEH6 219 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 GARTP22102 1010 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 STARD3Q14849 445 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 SCARA3Q6AZY7 606 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 ARMC6Q6NXE6 501 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 CCDC137Q6PK04 289 aaKnown RBP7.74□□□□□ -1.17
VPS13A-202ENST00000357409 SHCBP1Q8NEM2 672 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 REEP2Q9BRK0 252 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 CIDEBQ9UHD4 219 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 ORC6Q9Y5N6 252 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 GSSP48637 474 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 SDHAF4Q5VUM1 108 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 CCHCR1Q8TD31 782 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 GBA2Q9HCG7 927 aaPredicted RBP7.74□□□□□ -1.17
VPS13A-202ENST00000357409 JPH1Q9HDC5 661 aaPredicted RBP7.74□□□□□ -1.17
VPS13A-202ENST00000357409 STK17AQ9UEE5 414 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 SUN2Q9UH99 717 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 MAD2L2Q9UI95 211 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 CDC23Q9UJX2 597 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 APPL1Q9UKG1 709 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 CIAO1O76071 339 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 ADSLP30566 484 aaPredicted RBP7.74□□□□□ -1.17
VPS13A-202ENST00000357409 EFTUD2Q15029 972 aaKnown RBP eCLIP7.74□□□□□ -1.172e-7■■■■□ 23.8
VPS13A-202ENST00000357409 MYRIPQ8NFW9 859 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 TM6SF1Q9BZW5 370 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 DRC3Q9H069 523 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 PCDHGB4Q9UN71 923 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 INSRP06213 1382 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 SYN1P17600 705 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 KLRC1P26715 233 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 EPHB2P29323 1055 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 TAF11Q15544 211 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 GALNT17Q6IS24 598 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 CES3Q6UWW8 571 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 NSUN4Q96CB9 384 aaKnown RBP7.74□□□□□ -1.17
VPS13A-202ENST00000357409 TRIM51Q9BSJ1 452 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 UTP6Q9NYH9 597 aaKnown RBP7.74□□□□□ -1.17
VPS13A-202ENST00000357409 HOXB7P09629 217 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 ROR1Q01973 937 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 ELMSAN1Q6PJG2 1045 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 CENPTQ96BT3 561 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 GSDMAQ96QA5 445 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 BRIP1Q9BX63 1249 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 SLC24A3Q9HC58 644 aa7.74□□□□□ -1.17
VPS13A-202ENST00000357409 KATNA1O75449 491 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms