RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 SLC8B1Q6J4K2 584 aa18.45■□□□□ 0.54
SMN1-201ENST00000351205 PHLDB3Q6NSJ2 640 aa18.45■□□□□ 0.54
SMN1-201ENST00000351205 MTSS1LQ765P7 747 aa18.45■□□□□ 0.54
SMN1-201ENST00000351205 RTL10Q7L3V2 364 aa18.45■□□□□ 0.54
SMN1-201ENST00000351205 SYT2Q8N9I0 419 aaPredicted RBP18.45■□□□□ 0.54
SMN1-201ENST00000351205 TMEM161BQ8NDZ6 487 aa18.45■□□□□ 0.54
SMN1-201ENST00000351205 SPIRE2Q8WWL2 714 aa18.45■□□□□ 0.54
SMN1-201ENST00000351205 NKD2Q969F2 451 aaPredicted RBP18.45■□□□□ 0.54
SMN1-201ENST00000351205 C18orf25Q96B23 403 aaPredicted RBP18.45■□□□□ 0.54
SMN1-201ENST00000351205 TMX3Q96JJ7 454 aa18.45■□□□□ 0.54
SMN1-201ENST00000351205 ANKFY1Q9P2R3 1169 aa18.45■□□□□ 0.54
SMN1-201ENST00000351205 MIA3Q5JRA6 1907 aa18.45■□□□□ 0.54
SMN1-201ENST00000351205 COL4A3Q01955 1670 aa18.44■□□□□ 0.54
SMN1-201ENST00000351205 WDR27A2RRH5 827 aa18.44■□□□□ 0.54
SMN1-201ENST00000351205 TOM1L1O75674 476 aa18.44■□□□□ 0.54
SMN1-201ENST00000351205 CD2BP2O95400 341 aaKnown RBP18.44■□□□□ 0.54
SMN1-201ENST00000351205 MAPTP10636 758 aaKnown RBP18.44■□□□□ 0.54
SMN1-201ENST00000351205 GJB2P29033 226 aa18.44■□□□□ 0.54
SMN1-201ENST00000351205 SLC12A3P55017 1021 aa18.44■□□□□ 0.54
SMN1-201ENST00000351205 GPC5P78333 572 aa18.44■□□□□ 0.54
SMN1-201ENST00000351205 STRN3Q13033 797 aa18.44■□□□□ 0.54
SMN1-201ENST00000351205 NOLC1Q14978 699 aaKnown RBP eCLIP18.44■□□□□ 0.54
SMN1-201ENST00000351205 SEZ6Q53EL9 994 aa18.44■□□□□ 0.54
SMN1-201ENST00000351205 SPECC1Q5M775 1068 aa18.44■□□□□ 0.54
SMN1-201ENST00000351205 NPAS3Q8IXF0 933 aa18.44■□□□□ 0.54
SMN1-201ENST00000351205 ZNF461Q8TAF7 563 aa18.44■□□□□ 0.54
SMN1-201ENST00000351205 KCNH3Q9ULD8 1083 aa18.44■□□□□ 0.54
SMN1-201ENST00000351205 H3BQV1 296 aa18.43■□□□□ 0.54
SMN1-201ENST00000351205 SYN3O14994 580 aa18.43■□□□□ 0.54
SMN1-201ENST00000351205 ABLIM3O94929 683 aa18.43■□□□□ 0.54
SMN1-201ENST00000351205 DCNP07585 359 aaKnown RBP18.43■□□□□ 0.54
SMN1-201ENST00000351205 PLA2G4BP0C869 781 aa18.43■□□□□ 0.54
SMN1-201ENST00000351205 RPL9P32969 192 aaKnown RBP18.43■□□□□ 0.54
SMN1-201ENST00000351205 SMTNP53814 917 aa18.43■□□□□ 0.54
SMN1-201ENST00000351205 SLC10A6Q3KNW5 377 aa18.43■□□□□ 0.54
SMN1-201ENST00000351205 ING5Q8WYH8 240 aa18.43■□□□□ 0.54
SMN1-201ENST00000351205 CDK5RAP3Q96JB5 506 aa18.43■□□□□ 0.54
SMN1-201ENST00000351205 FOXQ1Q9C009 403 aa18.43■□□□□ 0.54
SMN1-201ENST00000351205 SIT1Q9Y3P8 196 aa18.43■□□□□ 0.54
SMN1-201ENST00000351205 NUB1Q9Y5A7 615 aa18.43■□□□□ 0.54
SMN1-201ENST00000351205 GVINP1Q7Z2Y8 2422 aa18.43■□□□□ 0.54
SMN1-201ENST00000351205 NPHP3-ACAD11A0A0J9YXS1 232 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 ARHGEF37A1IGU5 675 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 TBC1D4O60343 1298 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 RHOP08100 348 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 ARPP19P56211 112 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 CACNB1Q02641 598 aaPredicted RBP18.42■□□□□ 0.54
SMN1-201ENST00000351205 SLC5A9Q2M3M2 681 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 TMEM119Q4V9L6 283 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 ARL6IP4Q66PJ3 421 aaKnown RBP18.42■□□□□ 0.54
SMN1-201ENST00000351205 ZPBP2Q6X784 338 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 KCTD17Q8N5Z5 321 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 KXD1Q9BQD3 176 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 KCND2Q9NZV8 630 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 DLGAP2Q9P1A6 1054 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 TUBGCP4Q9UGJ1 667 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 KCNG1Q9UIX4 513 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 MRPS23Q9Y3D9 190 aaKnown RBP18.42■□□□□ 0.54
SMN1-201ENST00000351205 DCHS1Q96JQ0 3298 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 CACNA1IQ9P0X4 2223 aa18.42■□□□□ 0.54
SMN1-201ENST00000351205 PRRG1O14668 218 aa18.41■□□□□ 0.54
SMN1-201ENST00000351205 CLDN3O15551 220 aa18.41■□□□□ 0.54
SMN1-201ENST00000351205 LRG1P02750 347 aa18.41■□□□□ 0.54
SMN1-201ENST00000351205 ATF2P15336 505 aa18.41■□□□□ 0.54
SMN1-201ENST00000351205 ELF1P32519 619 aa18.41■□□□□ 0.54
SMN1-201ENST00000351205 MCM4P33991 863 aa18.41■□□□□ 0.54
SMN1-201ENST00000351205 STARD6P59095 220 aa18.41■□□□□ 0.54
SMN1-201ENST00000351205 MCL1Q07820 350 aa18.41■□□□□ 0.54
SMN1-201ENST00000351205 SNW1Q13573 536 aaKnown RBP18.41■□□□□ 0.54
SMN1-201ENST00000351205 MRPL58Q14197 206 aaKnown RBP18.41■□□□□ 0.54
SMN1-201ENST00000351205 TMEM130Q8N3G9 435 aa18.41■□□□□ 0.54
SMN1-201ENST00000351205 PJA1Q8NG27 643 aa18.41■□□□□ 0.54
SMN1-201ENST00000351205 HAPLN2Q9GZV7 340 aa18.41■□□□□ 0.54
SMN1-201ENST00000351205 FBXL5Q9UKA1 691 aa18.41■□□□□ 0.54
SMN1-201ENST00000351205 FRYLO94915 3013 aa18.41■□□□□ 0.54
SMN1-201ENST00000351205 H7C4K7 107 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 CXCL8P10145 99 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 GLULP15104 373 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 NCKAP1LP55160 1127 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 CTXN3Q4LDR2 81 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 ARSHQ5FYA8 562 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 POTEHQ6S545 545 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 TCEAL8Q8IYN2 117 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 MCRS1Q96EZ8 462 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 SHDQ96IW2 340 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 SUSD3Q96L08 255 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 TBC1D32Q96NH3 1257 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 CYP4F11Q9HBI6 524 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 AVENQ9NQS1 362 aaPredicted RBP18.4■□□□□ 0.54
SMN1-201ENST00000351205 FANCMQ8IYD8 2048 aa18.4■□□□□ 0.54
SMN1-201ENST00000351205 ZNF292O60281 2723 aa18.39■□□□□ 0.53
SMN1-201ENST00000351205 LRRN2O75325 713 aa18.39■□□□□ 0.53
SMN1-201ENST00000351205 SEC24AO95486 1093 aa18.39■□□□□ 0.53
SMN1-201ENST00000351205 CEBPBP17676 345 aa18.39■□□□□ 0.53
SMN1-201ENST00000351205 PTPN2P17706 415 aa18.39■□□□□ 0.53
SMN1-201ENST00000351205 MATR3P43243 847 aaKnown RBP eCLIP18.39■□□□□ 0.53
SMN1-201ENST00000351205 SPAG1Q07617 926 aa18.39■□□□□ 0.53
SMN1-201ENST00000351205 MLF2Q15773 248 aaPredicted RBP18.39■□□□□ 0.53
SMN1-201ENST00000351205 ZNF280DQ6N043 979 aa18.39■□□□□ 0.53
SMN1-201ENST00000351205 LRRC15Q8TF66 581 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms