RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 ADAMTS1Q9UHI8 967 aa11.83□□□□□ -0.52
ECM1-201ENST00000346569 SIX4Q9UIU6 781 aa11.83□□□□□ -0.52
ECM1-201ENST00000346569 OGDHLQ9ULD0 1010 aa11.83□□□□□ -0.52
ECM1-201ENST00000346569 NENFQ9UMX5 172 aa11.83□□□□□ -0.52
ECM1-201ENST00000346569 ST3GAL5Q9UNP4 418 aa11.83□□□□□ -0.52
ECM1-201ENST00000346569 C2CD2Q9Y426 696 aa11.83□□□□□ -0.52
ECM1-201ENST00000346569 SQORQ9Y6N5 450 aa11.83□□□□□ -0.52
ECM1-201ENST00000346569 M0QZ92 97 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 ARVCFO00192 962 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 TULP1O00294 542 aaPredicted RBP11.82□□□□□ -0.52
ECM1-201ENST00000346569 PJA2O43164 708 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 AKR1B10O60218 316 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 PHACTR2O75167 634 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 RPS6KA5O75582 802 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 TMEM191BP0C7N4 346 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 CCDC172P0C7W6 258 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 ACO1P21399 889 aaKnown RBP11.82□□□□□ -0.52
ECM1-201ENST00000346569 PIK3CAP42336 1068 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 MAGEA1P43355 309 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 MYL6P60660 151 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 ETF1P62495 437 aaKnown RBP11.82□□□□□ -0.52
ECM1-201ENST00000346569 TDRD12Q587J7 1177 aaKnown RBP11.82□□□□□ -0.52
ECM1-201ENST00000346569 FBXO47Q5MNV8 452 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 SPOPLQ6IQ16 392 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 C1orf127Q8N9H9 656 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 FAXDC2Q96IV6 333 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 C16orf45Q96MC5 204 aaPredicted RBP11.82□□□□□ -0.52
ECM1-201ENST00000346569 LACRTQ9GZZ8 138 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 RNF39Q9H2S5 420 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 AGO3Q9H9G7 860 aaKnown RBP11.82□□□□□ -0.52
ECM1-201ENST00000346569 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.82□□□□□ -0.52
ECM1-201ENST00000346569 CNTN6Q9UQ52 1028 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 PIN4Q9Y237 131 aaKnown RBP11.82□□□□□ -0.52
ECM1-201ENST00000346569 DERAQ9Y315 318 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 NUB1Q9Y5A7 615 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 PCDHA13Q9Y5I0 950 aa11.82□□□□□ -0.52
ECM1-201ENST00000346569 A0A0U1RQG5 324 aaPredicted RBP11.81□□□□□ -0.52
ECM1-201ENST00000346569 KBTBD13C9JR72 458 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 KIF2AO00139 706 aaPredicted RBP11.81□□□□□ -0.52
ECM1-201ENST00000346569 DNM1LO00429 736 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 DDX3XO00571 662 aaKnown RBP eCLIP11.81□□□□□ -0.521e-7■■■□□ 17.3
ECM1-201ENST00000346569 CAND2O75155 1236 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 SGPL1O95470 568 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 TNNC2P02585 160 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 NFICP08651 508 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 CCL5P13501 91 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 THPOP40225 353 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 VAV2P52735 878 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 GFPT1Q06210 699 aaPredicted RBP11.81□□□□□ -0.52
ECM1-201ENST00000346569 BMS1Q14692 1282 aaKnown RBP11.81□□□□□ -0.52
ECM1-201ENST00000346569 SPA17Q15506 151 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 PKN2Q16513 984 aaKnown RBP11.81□□□□□ -0.52
ECM1-201ENST00000346569 TRAF7Q6Q0C0 670 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 UBR7Q8N806 425 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 SMG8Q8ND04 991 aaKnown RBP11.81□□□□□ -0.52
ECM1-201ENST00000346569 TAF4BQ92750 862 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 ZMAT2Q96NC0 199 aaKnown RBP11.81□□□□□ -0.52
ECM1-201ENST00000346569 TSPAN18Q96SJ8 248 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 TRPV6Q9H1D0 765 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 CXCL16Q9H2A7 254 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 DEF6Q9H4E7 631 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 VRTNQ9H8Y1 702 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 ERVK-5Q9HDB9 667 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 STARD7Q9NQZ5 370 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 HES2Q9Y543 173 aa11.81□□□□□ -0.52
ECM1-201ENST00000346569 UMODL1Q5DID0 1318 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 ANK1P16157 1881 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 GPR182O15218 404 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 CTSHP09668 335 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 NOP14P78316 857 aaKnown RBP11.8□□□□□ -0.52
ECM1-201ENST00000346569 TRPC3Q13507 836 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 CUL2Q13617 745 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 DSC3Q14574 896 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 C10orf76Q5T2E6 689 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 ZNF618Q5T7W0 954 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 MRPL10Q7Z7H8 261 aaKnown RBP11.8□□□□□ -0.52
ECM1-201ENST00000346569 LNX1Q8TBB1 728 aaPredicted RBP11.8□□□□□ -0.52
ECM1-201ENST00000346569 SNX27Q96L92 541 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 DEFB118Q96PH6 123 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 TRAIPQ9BWF2 469 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 IRX2Q9BZI1 471 aaPredicted RBP11.8□□□□□ -0.52
ECM1-201ENST00000346569 NXF3Q9H4D5 531 aaKnown RBP11.8□□□□□ -0.52
ECM1-201ENST00000346569 CNTN3Q9P232 1028 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 NAGPAQ9UK23 515 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 PADI3Q9ULW8 664 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 TFR2Q9UP52 801 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 IPPQ9Y573 584 aa11.8□□□□□ -0.52
ECM1-201ENST00000346569 FANCGO15287 622 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 CYP26A1O43174 497 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 ZNF623O75123 536 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 RECQL4O94761 1208 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 IPO7O95373 1038 aaKnown RBP11.79□□□□□ -0.52
ECM1-201ENST00000346569 STAU1O95793 577 aaKnown RBP11.79□□□□□ -0.52
ECM1-201ENST00000346569 CD4P01730 458 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 CKBP12277 381 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 KCNE1P15382 129 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 CHRNB2P17787 502 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 TBXAS1P24557 533 aaPredicted RBP11.79□□□□□ -0.52
ECM1-201ENST00000346569 ATICP31939 592 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 YARSP54577 528 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms