RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 VPS11Q9H270 941 aa14.31□□□□□ -0.12
TRIO-202ENST00000344204 CHD5Q8TDI0 1954 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 TRIM43BA6NCK2 446 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 KLRF2D3W0D1 207 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 DDX39AO00148 427 aaKnown RBP14.3□□□□□ -0.12
TRIO-202ENST00000344204 GALK1P51570 392 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 PABPC4Q13310 644 aaKnown RBP eCLIP14.3□□□□□ -0.12
TRIO-202ENST00000344204 H0YC42 278 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 SRGAP2CP0DJJ0 459 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 SP4Q02446 784 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 CLEC4FQ8N1N0 589 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 KIAA1683Q9H0B3 1180 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 MBD2Q9UBB5 411 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 CIAO1O76071 339 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 PMLP29590 882 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 USH1GQ495M9 461 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 ACCSQ96QU6 501 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 PDZK1P1A8MUH7 402 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 ETS2P15036 469 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 MAGEA4P43358 317 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 NUDT2P50583 147 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 VWA5AO00534 786 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 COASYQ13057 564 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 MYBPC2Q14324 1141 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 DRAP1Q14919 205 aaPredicted RBP14.3□□□□□ -0.12
TRIO-202ENST00000344204 UBE3CQ15386 1083 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 DHX38Q92620 1227 aaKnown RBP14.3□□□□□ -0.12
TRIO-202ENST00000344204 ZBED4O75132 1171 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 FNTAP49354 379 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 NCKAP1LP55160 1127 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 ZFP1Q6P2D0 407 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 ANKMY2Q8IV38 441 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 EML4Q9HC35 981 aaKnown RBP14.3□□□□□ -0.12
TRIO-202ENST00000344204 TFR2Q9UP52 801 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 ADORA1P30542 326 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 ZNF618Q5T7W0 954 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 SUN5Q8TC36 379 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 NAT14Q8WUY8 206 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 JAG2Q9Y219 1238 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 RAG1P15918 1043 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 ITGADQ13349 1161 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 CHI3L2Q15782 390 aa14.3□□□□□ -0.12
TRIO-202ENST00000344204 CLVS1Q8IUQ0 354 aaPredicted RBP14.3□□□□□ -0.12
TRIO-202ENST00000344204 DGCR14Q96DF8 476 aaKnown RBP14.3□□□□□ -0.12
TRIO-202ENST00000344204 PSTPIP1O43586 416 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 VAV1P15498 845 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 RBM44Q6ZP01 1051 aaKnown RBP14.29□□□□□ -0.12
TRIO-202ENST00000344204 ITGA9Q13797 1035 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 LRRC59Q96AG4 307 aaKnown RBP14.29□□□□□ -0.12
TRIO-202ENST00000344204 TMEM120AQ9BXJ8 343 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 PREX2Q70Z35 1606 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 BNC2Q6ZN30 1099 aaPredicted RBP14.29□□□□□ -0.12
TRIO-202ENST00000344204 BORCS5Q969J3 196 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 ATP6V1HQ9UI12 483 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 NR1H2P55055 460 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 PCYOX1LQ8NBM8 494 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 APOL4Q9BPW4 351 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 PPME1Q9Y570 386 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 MAGI3Q5TCQ9 1506 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 MAGEA8P43361 318 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 LIG4P49917 911 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 RAB27AP51159 221 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 ITGA8P53708 1063 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 ANKRD36BP1Q96IX9 119 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 SKIV2L2P42285 1042 aaKnown RBP14.29□□□□□ -0.12
TRIO-202ENST00000344204 KCNB2Q92953 911 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 PPP1R36Q96LQ0 422 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 DRD4P21917 467 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 FANCEQ9HB96 536 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 MAP1BP46821 2468 aaKnown RBP14.29□□□□□ -0.12
TRIO-202ENST00000344204 POGZQ7Z3K3 1410 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 ARMC4Q5T2S8 1044 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 AGBL1Q96MI9 1066 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 TMOD4Q9NZQ9 345 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 NEU2Q9Y3R4 380 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 IVNS1ABPQ9Y6Y0 642 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 ALOX15P16050 662 aaPredicted RBP14.29□□□□□ -0.12
TRIO-202ENST00000344204 CCDC60Q8IWA6 550 aaPredicted RBP14.29□□□□□ -0.12
TRIO-202ENST00000344204 NUP93Q8N1F7 819 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 TSPAN14Q8NG11 270 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 ATP6V1E2Q96A05 226 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 ECSITQ9BQ95 431 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 DSEQ9UL01 958 aa14.29□□□□□ -0.12
TRIO-202ENST00000344204 CYTH3O43739 400 aa14.28□□□□□ -0.12
TRIO-202ENST00000344204 PLEKP08567 350 aaPredicted RBP14.28□□□□□ -0.12
TRIO-202ENST00000344204 ABCE1P61221 599 aaKnown RBP14.28□□□□□ -0.12
TRIO-202ENST00000344204 PDK3Q15120 406 aa14.28□□□□□ -0.12
TRIO-202ENST00000344204 HABP4Q5JVS0 413 aaKnown RBP14.28□□□□□ -0.12
TRIO-202ENST00000344204 KAT2BQ92831 832 aa14.28□□□□□ -0.12
TRIO-202ENST00000344204 C9orf72Q96LT7 481 aa14.28□□□□□ -0.12
TRIO-202ENST00000344204 ATP7BP35670 1465 aa14.28□□□□□ -0.12
TRIO-202ENST00000344204 POTECB2RU33 542 aa14.28□□□□□ -0.12
TRIO-202ENST00000344204 POLR2EP19388 210 aaKnown RBP14.28□□□□□ -0.12
TRIO-202ENST00000344204 SP100P23497 879 aaPredicted RBP14.28□□□□□ -0.12
TRIO-202ENST00000344204 OR8H2Q8N162 312 aa14.28□□□□□ -0.12
TRIO-202ENST00000344204 TEX12Q9BXU0 123 aa14.28□□□□□ -0.12
TRIO-202ENST00000344204 SCN3BQ9NY72 215 aa14.28□□□□□ -0.12
TRIO-202ENST00000344204 RPL26L1Q9UNX3 145 aaKnown RBP14.28□□□□□ -0.12
TRIO-202ENST00000344204 MREGQ8N565 214 aa14.28□□□□□ -0.12
TRIO-202ENST00000344204 CEP44Q9C0F1 390 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms