RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 H3BRJ5 948 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 BCAR1P56945 870 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 PHEXP78562 749 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 RIBC1Q8N443 379 aaPredicted RBP15.66■□□□□ 0.1
RRP1B-201ENST00000340648 PCDHGC5Q9Y5F6 944 aa15.66■□□□□ 0.1
RRP1B-201ENST00000340648 RIMS1Q86UR5 1692 aaKnown RBP15.65■□□□□ 0.1
RRP1B-201ENST00000340648 M0QYV0 167 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 SFNP31947 248 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 RCN1Q15293 331 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 KCNK18Q7Z418 384 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 TBC1D16Q8TBP0 767 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 INPP5FQ9Y2H2 1132 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 ANKRD26Q9UPS8 1709 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 KRT4P19013 534 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 CENPCQ03188 943 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 PTK7Q13308 1070 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 VGLL2Q8N8G2 317 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 RPS6KC1Q96S38 1066 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 XPO7Q9UIA9 1087 aaKnown RBP15.65■□□□□ 0.1
RRP1B-201ENST00000340648 MID2Q9UJV3 735 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 GPR75-ASB3A0A0A6YYF3 556 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 RIPK2O43353 540 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 ASNSP08243 561 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 TNFRSF8P28908 595 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 VHLP40337 213 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 ACSF2Q96CM8 615 aaPredicted RBP15.65■□□□□ 0.1
RRP1B-201ENST00000340648 MANSC1Q9H8J5 431 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 CASP2P42575 452 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 RPL21P46778 160 aaKnown RBP15.65■□□□□ 0.1
RRP1B-201ENST00000340648 PSMC6P62333 389 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 THOC5Q13769 683 aaKnown RBP15.65■□□□□ 0.1
RRP1B-201ENST00000340648 FAM102AQ5T9C2 384 aaPredicted RBP15.65■□□□□ 0.1
RRP1B-201ENST00000340648 NLRP9Q7RTR0 991 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 NT5DC3Q86UY8 548 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 MTBPQ96DY7 904 aa15.65■□□□□ 0.1
RRP1B-201ENST00000340648 ZNF668Q96K58 619 aaPredicted RBP15.65■□□□□ 0.1
RRP1B-201ENST00000340648 ZNF277Q9NRM2 450 aaPredicted RBP15.65■□□□□ 0.1
RRP1B-201ENST00000340648 O00370 1275 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 DDX3XO00571 662 aaKnown RBP eCLIP15.64■□□□□ 0.094e-21■■■■■ 62.2
RRP1B-201ENST00000340648 EEF1B2P24534 225 aaKnown RBP15.64■□□□□ 0.09
RRP1B-201ENST00000340648 TXNRD3Q86VQ6 643 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 ALKBH8Q96BT7 664 aaKnown RBP15.64■□□□□ 0.09
RRP1B-201ENST00000340648 SDCCAG3Q96C92 435 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 FOXP3Q9BZS1 431 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 KNDC1Q76NI1 1749 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 PPP4CP60510 307 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 PLA2G4FQ68DD2 849 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 TEKT4Q8WW24 435 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 NSL1Q96IY1 281 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 MTRQ99707 1265 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 POLR3CQ9BUI4 534 aaPredicted RBP15.64■□□□□ 0.09
RRP1B-201ENST00000340648 FAM96AQ9H5X1 160 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 STK32BQ9NY57 414 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 KCND2Q9NZV8 630 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 PRR12Q9ULL5 1215 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 CES2O00748 559 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 CYTH3O43739 400 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 KRT10P13645 584 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 MED21Q13503 144 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 TRADDQ15628 312 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 YTHDF3Q7Z739 585 aaKnown RBP15.64■□□□□ 0.09
RRP1B-201ENST00000340648 IRF2BP1Q8IU81 584 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 RBBP8NLQ8NC74 664 aaPredicted RBP15.64■□□□□ 0.09
RRP1B-201ENST00000340648 NAF1Q96HR8 494 aaKnown RBP15.64■□□□□ 0.09
RRP1B-201ENST00000340648 KRT3P12035 628 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 COG2Q14746 738 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 GADL1Q6ZQY3 521 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 ZNF662Q6ZS27 426 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 CD302Q8IX05 232 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 TRPV6Q9H1D0 765 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 MTO1Q9Y2Z2 717 aaKnown RBP15.64■□□□□ 0.09
RRP1B-201ENST00000340648 PCDHB2Q9Y5E7 798 aa15.64■□□□□ 0.09
RRP1B-201ENST00000340648 ELF3P78545 371 aaPredicted RBP15.63■□□□□ 0.09
RRP1B-201ENST00000340648 ZNF200P98182 395 aaPredicted RBP15.63■□□□□ 0.09
RRP1B-201ENST00000340648 CDC42EP5Q6NZY7 148 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 MRPL46Q9H2W6 279 aaKnown RBP15.63■□□□□ 0.09
RRP1B-201ENST00000340648 RXFP1Q9HBX9 757 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 TMEM8AQ9HCN3 771 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 IRAK4Q9NWZ3 460 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 WHRNQ9P202 907 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 NYAP2Q9P242 653 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 OSBPP22059 807 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 PODNQ7Z5L7 613 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 TATDN2Q93075 761 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 SNX25Q9H3E2 840 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 HEY2Q9UBP5 337 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 OPLAHO14841 1288 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 P4HA2O15460 535 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 SRGAP2BP0DMP2 458 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 DEUP1Q05D60 604 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 ACAD10Q6JQN1 1059 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 ATXN7L3BQ96GX2 97 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 DRC3Q9H069 523 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 UPF3AQ9H1J1 476 aaKnown RBP15.63■□□□□ 0.09
RRP1B-201ENST00000340648 ABCF3Q9NUQ8 709 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 ZFATQ9P243 1243 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 KPNA7A9QM74 516 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 ECE2O60344 883 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 MAPK6Q16659 721 aa15.63■□□□□ 0.09
RRP1B-201ENST00000340648 DNAL1Q4LDG9 190 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms