RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 DEF6Q9H4E7 631 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 HAUS4Q9H6D7 363 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 PLEKHA5Q9HAU0 1116 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 APOBEC3GQ9HC16 384 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 SPTLC3Q9NUV7 552 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 PARP2Q9UGN5 583 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 PDCD11Q14690 1871 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ZSCAN12O43309 604 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 EVI5O60447 810 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CCDC175P0C221 793 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 FERP16591 822 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ZSCAN20P17040 1043 aaPredicted RBP15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ATN1P54259 1190 aaPredicted RBP15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 MYL6P60660 151 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 MAPK8IP2Q13387 824 aaPredicted RBP15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 C1orf127Q8N9H9 656 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ARMC5Q96C12 935 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 KIF12Q96FN5 646 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 PPP1R13BQ96KQ4 1090 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 KLK14Q9P0G3 267 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 C2CD2Q9Y426 696 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 PCDHB2Q9Y5E7 798 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 SSU72P8A0A1W2PR75 194 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 KRT19P08727 400 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 PRKCIP41743 596 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 GUCY2FP51841 1108 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 KIF11P52732 1056 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 NOP14P78316 857 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 GCNT1Q02742 428 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ALKAL1Q6UXT8 129 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 NT5DC4Q86YG4 428 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 REXO1L1PQ8IX06 675 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CAGE1Q8TC20 777 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 IMPG2Q9BZV3 1241 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 FAM105AQ9NUU6 356 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 RNF19AQ9NV58 838 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 NUB1Q9Y5A7 615 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 SQORQ9Y6N5 450 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 UMODL1Q5DID0 1318 aa15.87■□□□□ 0.13
CDK5RAP3-201ENST00000338399 EIF3CLB5ME19 914 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CCP110O43303 1012 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 AKR1B10O60218 316 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 MGEA5O60502 916 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 PQBP1O60828 265 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ASS1P00966 412 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CD4P01730 458 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ITGB3P05106 788 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 USP8P40818 1118 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 PTK2Q05397 1052 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 MBTPS1Q14703 1052 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 SGSM1Q2NKQ1 1148 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ASTE1Q2TB18 679 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 GLRA4Q5JXX5 417 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 USP38Q8NB14 1042 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 SHC3Q92529 594 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ZMAT2Q96NC0 199 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 EIF3CQ99613 913 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ARID3AQ99856 593 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 DPP3Q9NY33 737 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CNTN3Q9P232 1028 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 SIX4Q9UIU6 781 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 BZW2Q9Y6E2 419 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 SLC39A5Q6ZMH5 540 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ENOSF1Q7L5Y1 443 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ZNF571Q7Z3V5 609 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 FMNL3Q8IVF7 1028 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 DIS3LQ8TF46 1054 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 FAM81BQ96LP2 452 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 DERAQ9Y315 318 aa15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 REXO2Q9Y3B8 237 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-201ENST00000338399 A0A0U1RQJ8 604 aa15.85■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ZNF263O14978 683 aa15.85■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CCDC172P0C7W6 258 aa15.85■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CYP27A1Q02318 531 aa15.85■□□□□ 0.13
CDK5RAP3-201ENST00000338399 BFSP2Q13515 415 aa15.85■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CUL2Q13617 745 aa15.85■□□□□ 0.13
CDK5RAP3-201ENST00000338399 DSC3Q14574 896 aa15.85■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ZNF699Q32M78 642 aa15.85■□□□□ 0.13
CDK5RAP3-201ENST00000338399 LRRC8DQ7L1W4 858 aa15.85■□□□□ 0.13
CDK5RAP3-201ENST00000338399 FAM71AQ8IYT1 594 aa15.85■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CXorf38Q8TB03 319 aa15.85■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ATRIPQ8WXE1 791 aa15.85■□□□□ 0.13
CDK5RAP3-201ENST00000338399 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.85■□□□□ 0.131e-6■□□□□ 8
CDK5RAP3-201ENST00000338399 XYLT2Q9H1B5 865 aa15.85■□□□□ 0.13
CDK5RAP3-201ENST00000338399 SMIM28A0A1B0GU29 152 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 MEIS3P2A8K0S8 358 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 TLR3O15455 904 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CYP26A1O43174 497 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 OFD1O75665 1012 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 SELPP16109 830 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 POLR2BP30876 1174 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 GJA8P48165 433 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 GFPT1Q06210 699 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ZBTB6Q15916 424 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 XKR4Q5GH76 650 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ADAM2Q99965 735 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ADAMTS1Q9UHI8 967 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ITGA11Q9UKX5 1188 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 AGAP1Q9UPQ3 857 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 IPO7O95373 1038 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms