RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 TRAF3IP3Q9Y228 551 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 B3GAT3O94766 335 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 ZFXP17010 805 aaPredicted RBP9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 CLK2P49760 499 aaKnown RBP9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 PRAMEF19Q5SWL8 479 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 CLEC4DQ8WXI8 215 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 CBWD1Q9BRT8 395 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 RIPK3Q9Y572 518 aa9.9□□□□□ -0.83
FNDC3B-201ENST00000336824 SMIM23A6NLE4 172 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 FTCDO95954 541 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 MMP3P08254 477 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 GRK4P32298 578 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 SLC12A2P55011 1212 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 CXCL17Q6UXB2 119 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 USP38Q8NB14 1042 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 KIF9Q9HAQ2 790 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 CYP3A43Q9HB55 503 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 UVRAGQ9P2Y5 699 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 ZNF214Q9UL59 606 aaPredicted RBP9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 XPAP23025 273 aaPredicted RBP9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 DARS2Q6PI48 645 aaKnown RBP9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 ADAT2Q7Z6V5 191 aaKnown RBP9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 EXOC4Q96A65 974 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 MTMR12Q9C0I1 747 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 FAM114A2Q9NRY5 505 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 MAFO75444 373 aaPredicted RBP9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 ECEL1O95672 775 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 PLCB4Q15147 1175 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 EFHC2Q5JST6 749 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 SENP6Q9GZR1 1112 aaPredicted RBP9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 PALMO75781 387 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 ALDH1A3P47895 512 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 SARSP49591 514 aaKnown RBP9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 RWDD4Q6NW29 188 aaKnown RBP9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 KIAA0895Q8NCT3 520 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 TNFRSF25Q93038 417 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 SELENOSQ9BQE4 189 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 SEZ6LQ9BYH1 1024 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 BLOC1S4Q9NUP1 217 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 ANO9A1A5B4 782 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 A6NNZ2 444 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 CCDC188H7C350 402 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 EGFRP00533 1210 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 FAM200BP0CF97 657 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 LHX1P48742 406 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 TUBB8Q3ZCM7 444 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 KLHDC7AQ5VTJ3 777 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 BSPRYQ5W0U4 402 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 ARHGEF18Q6ZSZ5 1173 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 SLC51AQ86UW1 340 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 ARHGAP18Q8N392 663 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 ZWILCHQ9H900 591 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 ENC1O14682 589 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 AMHP03971 560 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 MRPS6P82932 125 aaKnown RBP9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 MAP4K3Q8IVH8 894 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 RHOT1Q8IXI2 618 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 DPF3Q92784 378 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 SEMA6BQ9H3T3 888 aa9.89□□□□□ -0.83
FNDC3B-201ENST00000336824 CBWD2Q8IUF1 395 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 GLYCTKQ8IVS8 523 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 HSD17B14Q9BPX1 270 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 APLP1P51693 650 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 PIGHQ14442 188 aaPredicted RBP9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 CD99L2Q8TCZ2 262 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 PURBQ96QR8 312 aaKnown RBP9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 KLK14Q9P0G3 267 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 PCDHB12Q9Y5F1 795 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 HIRAP54198 1017 aaPredicted RBP9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 NDUFAF2Q8N183 169 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 BRI3BPQ8WY22 251 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 CDKL2Q92772 493 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 TSPAN18Q96SJ8 248 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 KCNK9Q9NPC2 374 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 LRP5O75197 1615 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 MAPK13O15264 365 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 PARNO95453 639 aaKnown RBP9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 PDGFRBP09619 1106 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 LCP1P13796 627 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 ABHD15Q6UXT9 468 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 PHLDB2Q86SQ0 1253 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 PKNOX2Q96KN3 472 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 TTC1Q99614 292 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 DOCK2Q92608 1830 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 ZBED1O96006 694 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 PAX3P23760 479 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 RNF219Q5W0B1 726 aaPredicted RBP9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 C1orf228Q6PIY5 440 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 MTHFD1LQ6UB35 978 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 NUDT18Q6ZVK8 323 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 RABGGTAQ92696 567 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 VAV3Q9UKW4 847 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 NR2E3Q9Y5X4 410 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 TIAM2Q8IVF5 1701 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 ANKS4BQ8N8V4 417 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 FAM107BQ9H098 131 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 DPP7Q9UHL4 492 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 PTPN22Q9Y2R2 807 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 ECM29Q5VYK3 1845 aa9.88□□□□□ -0.83
FNDC3B-201ENST00000336824 PGK1P00558 417 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms