RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SMIM10L2BP0DMW5 78 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 RAG1P15918 1043 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 GCLMP48507 274 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 OLFML2BQ68BL8 750 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 PAF1Q8N7H5 531 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 THOC1Q96FV9 657 aaKnown RBP12.59□□□□□ -0.39
HDAC6-201ENST00000334136 FMO2Q99518 471 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 RNF14Q9UBS8 474 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 PTCH2Q9Y6C5 1203 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 A0A1B0GUL6 1792 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 KIAA0391O15091 583 aaKnown RBP12.58□□□□□ -0.4
HDAC6-201ENST00000334136 CNMDO75829 334 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 UPP2O95045 317 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 ASGR1P07306 291 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 SPATA31C1P0DKV0 1188 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 SCP2P22307 547 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 GPC3P51654 580 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 UGCGQ16739 394 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 KYAT1Q16773 422 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 NOTUMQ6P988 496 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 CROCCP2Q86T23 111 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 URGCPQ8TCY9 931 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 NCAPGQ9BPX3 1015 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 VPS37BQ9H9H4 285 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 MLXIPLQ9NP71 852 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 TMEM39AQ9NV64 488 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 HSPBP1Q9NZL4 362 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 DUSP10Q9Y6W6 482 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-201ENST00000334136 GPR182O15218 404 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 GAS8O95995 478 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 ADCY8P40145 1251 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 CORO7P57737 925 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 KCNA10Q16322 511 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 NBPF20Q3BBV1 942 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 TTC16Q8NEE8 873 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 BEST2Q8NFU1 509 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 PGBD4Q96DM1 585 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 SNX12Q9UMY4 172 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 THAP12O43422 761 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 SUN1O94901 812 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 VAMP7P51809 220 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 MUM1Q2TAK8 710 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 NLRP14Q86W24 1093 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.58□□□□□ -0.4
HDAC6-201ENST00000334136 RNPEPQ9H4A4 650 aa12.58□□□□□ -0.4
HDAC6-201ENST00000334136 MYO1FO00160 1098 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 LBX1P52954 281 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 FYB2Q5VWT5 728 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 CCDC13Q8IYE1 715 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 SHISA4Q96DD7 197 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 MBOAT7Q96N66 472 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 MMTAG2Q9BU76 263 aaKnown RBP12.57□□□□□ -0.4
HDAC6-201ENST00000334136 GCNT4Q9P109 453 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 FRMPD4Q14CM0 1322 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 FGGP02679 453 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 SNX1Q13596 522 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 FAM117BQ6P1L5 589 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 DSTYKQ6XUX3 929 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 HNRNPLLQ8WVV9 542 aaKnown RBP12.57□□□□□ -0.4
HDAC6-201ENST00000334136 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 CAPN11Q9UMQ6 739 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 SNX24Q9Y343 169 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 TIAM2Q8IVF5 1701 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 ARHGEF37A1IGU5 675 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 EIF3HO15372 352 aaKnown RBP eCLIP12.57□□□□□ -0.42e-6■■■□□ 16.8
HDAC6-201ENST00000334136 MEFVO15553 781 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-201ENST00000334136 PPP1R37O75864 691 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 SNAI1O95863 264 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-201ENST00000334136 SERPING1P05155 500 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 CD44P16070 742 aaKnown RBP12.57□□□□□ -0.4
HDAC6-201ENST00000334136 KLK7P49862 253 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 SLC12A3P55017 1021 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 MFAP3P55082 362 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 CACNB2Q08289 660 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-201ENST00000334136 ITGA7Q13683 1181 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 ANKRD20A3Q5VUR7 823 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 ANO5Q75V66 913 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 ZNF720Q7Z2F6 126 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 METTL23Q86XA0 190 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 ANKZF1Q9H8Y5 726 aa12.57□□□□□ -0.4
HDAC6-201ENST00000334136 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDAC6-201ENST00000334136 GMNCA6NCL1 334 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 ARIH2O95376 493 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 KCNH2Q12809 1159 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 GDAP1Q8TB36 358 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 LENG9Q96B70 501 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 ACTR5Q9H9F9 607 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-201ENST00000334136 MYH4Q9Y623 1939 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 CSPG5O95196 566 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 ZRANB2O95218 330 aaKnown RBP eCLIP12.56□□□□□ -0.4
HDAC6-201ENST00000334136 TRIM49P0CI25 452 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 TRIM49CP0CI26 452 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 GHRP10912 638 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 ITGA4P13612 1032 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 BFSP1Q12934 665 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 DUOXA2Q1HG44 320 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 ZNF667Q5HYK9 610 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 NUGGCQ68CJ6 796 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 C1orf186Q6ZWK4 172 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms