RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 PCK1P35558 622 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 IRX1P78414 480 aaPredicted RBP15.53■□□□□ 0.08
SSBP3-201ENST00000326956 ZNF449Q6P9G9 518 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 DHX38Q92620 1227 aaKnown RBP15.53■□□□□ 0.08
SSBP3-201ENST00000326956 TRIM11Q96F44 468 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 RIT2Q99578 217 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 SH2D3AQ9BRG2 576 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 SAYSD1Q9NPB0 183 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 HAO1Q9UJM8 370 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 R3HDM2Q9Y2K5 976 aaKnown RBP15.53■□□□□ 0.08
SSBP3-201ENST00000326956 STARD13Q9Y3M8 1113 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 GREB1LQ9C091 1923 aaPredicted RBP15.52■□□□□ 0.08
SSBP3-201ENST00000326956 NSFP46459 744 aaKnown RBP15.52■□□□□ 0.08
SSBP3-201ENST00000326956 SEPT7Q16181 437 aaKnown RBP15.52■□□□□ 0.08
SSBP3-201ENST00000326956 HHATQ5VTY9 493 aa15.52■□□□□ 0.08
SSBP3-201ENST00000326956 NAIF1Q69YI7 327 aaPredicted RBP15.52■□□□□ 0.08
SSBP3-201ENST00000326956 NAF1Q96HR8 494 aaKnown RBP15.52■□□□□ 0.08
SSBP3-201ENST00000326956 C8orf37Q96NL8 207 aa15.52■□□□□ 0.08
SSBP3-201ENST00000326956 ANKRD27Q96NW4 1050 aa15.52■□□□□ 0.08
SSBP3-201ENST00000326956 TRABDQ9H4I3 376 aa15.52■□□□□ 0.08
SSBP3-201ENST00000326956 DBNDD1Q9H9R9 158 aa15.52■□□□□ 0.08
SSBP3-201ENST00000326956 TMEM8AQ9HCN3 771 aa15.52■□□□□ 0.08
SSBP3-201ENST00000326956 RAB20Q9NX57 234 aa15.52■□□□□ 0.08
SSBP3-201ENST00000326956 VIL1P09327 827 aaKnown RBP15.52■□□□□ 0.07
SSBP3-201ENST00000326956 RAD23BP54727 409 aa15.52■□□□□ 0.07
SSBP3-201ENST00000326956 PARP6Q2NL67 630 aa15.52■□□□□ 0.07
SSBP3-201ENST00000326956 SH3BP5LQ7L8J4 393 aa15.52■□□□□ 0.07
SSBP3-201ENST00000326956 LMNTD2Q8IXW0 634 aa15.52■□□□□ 0.07
SSBP3-201ENST00000326956 MRRFQ96E11 262 aaKnown RBP15.52■□□□□ 0.07
SSBP3-201ENST00000326956 TMEM237Q96Q45 408 aa15.52■□□□□ 0.07
SSBP3-201ENST00000326956 VPS37BQ9H9H4 285 aa15.52■□□□□ 0.07
SSBP3-201ENST00000326956 USTQ9Y2C2 406 aa15.52■□□□□ 0.07
SSBP3-201ENST00000326956 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.52■□□□□ 0.07
SSBP3-201ENST00000326956 CCDC189A1A4V9 331 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 PMM2O15305 246 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 CA4P22748 312 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 SNRPFP62306 86 aaKnown RBP15.51■□□□□ 0.07
SSBP3-201ENST00000326956 CCNG2Q16589 344 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 P3H1Q32P28 736 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 SLC17A8Q8NDX2 589 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.51■□□□□ 0.07
SSBP3-201ENST00000326956 TAS1R2Q8TE23 839 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 CHURC1Q8WUH1 139 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 CPA5Q8WXQ8 436 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 ZNF622Q969S3 477 aaKnown RBP eCLIP15.51■□□□□ 0.07
SSBP3-201ENST00000326956 IDI2Q9BXS1 227 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 LRMDAQ9H2I8 198 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 RNPEPL1Q9HAU8 725 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 UBN1Q9NPG3 1134 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 WDR4P57081 412 aaKnown RBP15.51■□□□□ 0.07
SSBP3-201ENST00000326956 LMNB2Q03252 620 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 FAM102BQ5T8I3 360 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 LIN9Q5TKA1 542 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 CAPN12Q6ZSI9 719 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 MCOLN2Q8IZK6 566 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 HELQQ8TDG4 1101 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 ELMO3Q96BJ8 720 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 NUDCD1Q96RS6 583 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 OSBPL8Q9BZF1 889 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 FOXP3Q9BZS1 431 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 ZHX2Q9Y6X8 837 aa15.51■□□□□ 0.07
SSBP3-201ENST00000326956 SMNDC1O75940 238 aaKnown RBP eCLIP15.5■□□□□ 0.07
SSBP3-201ENST00000326956 MYBL1P10243 752 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 CALB2P22676 271 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 RARRES1P49788 294 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 YARSP54577 528 aaKnown RBP15.5■□□□□ 0.07
SSBP3-201ENST00000326956 GTF2BQ00403 316 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 SATB1Q01826 763 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 RHOT1Q8IXI2 618 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 PARD3BQ8TEW8 1205 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 MXRA8Q9BRK3 442 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 OSBPL1AQ9BXW6 950 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 CORO1CQ9ULV4 474 aaPredicted RBP15.5■□□□□ 0.07
SSBP3-201ENST00000326956 EIF4E1BA6NMX2 242 aaKnown RBP15.5■□□□□ 0.07
SSBP3-201ENST00000326956 LIN7AO14910 233 aaPredicted RBP15.5■□□□□ 0.07
SSBP3-201ENST00000326956 QARSP47897 775 aaKnown RBP15.5■□□□□ 0.07
SSBP3-201ENST00000326956 GPC3P51654 580 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 BLMHQ13867 455 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 FYB2Q5VWT5 728 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 PRUNE1Q86TP1 453 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 LONP2Q86WA8 852 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 TTC25Q96NG3 672 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 HERPUD2Q9BSE4 406 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 AVENQ9NQS1 362 aaPredicted RBP15.5■□□□□ 0.07
SSBP3-201ENST00000326956 TOPORSQ9NS56 1045 aaPredicted RBP15.5■□□□□ 0.07
SSBP3-201ENST00000326956 C1orf112Q9NSG2 853 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 SMG5Q9UPR3 1016 aaKnown RBP15.5■□□□□ 0.07
SSBP3-201ENST00000326956 ZNF148Q9UQR1 794 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 SMCHD1A6NHR9 2005 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 ATP2A1O14983 1001 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 CALCAP01258 141 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 ABHD2P08910 425 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 ECE1P42892 770 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 CCNHP51946 323 aaPredicted RBP15.5■□□□□ 0.07
SSBP3-201ENST00000326956 C2CD6Q53TS8 623 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 TRABD2AQ86V40 505 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 C4orf33Q8N1A6 199 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 TEX9Q8N6V9 391 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 INPP5DQ92835 1189 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 DDX27Q96GQ7 796 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms