RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 FBXO40Q9UH90 709 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 ZNFX1Q9P2E3 1918 aaKnown RBP23.86■■□□□ 1.41
PNKP-201ENST00000322344 A0A0B4J269 797 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 GMNCA6NCL1 334 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 VNN1O95497 513 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 ADCY2Q08462 1091 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 CALCOCO2Q13137 446 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 PPP1R7Q15435 360 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 MON1BQ7L1V2 547 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 ANKRD35Q8N283 1001 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 CPA5Q8WXQ8 436 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 WHRNQ9P202 907 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 FZD1Q9UP38 647 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 DOCK5Q9H7D0 1870 aa23.86■■□□□ 1.41
PNKP-201ENST00000322344 SIP14410 1827 aa23.85■■□□□ 1.41
PNKP-201ENST00000322344 TRAPPC3O43617 180 aa23.85■■□□□ 1.41
PNKP-201ENST00000322344 SEC24CP53992 1094 aa23.85■■□□□ 1.41
PNKP-201ENST00000322344 C6orf118Q5T5N4 469 aa23.85■■□□□ 1.41
PNKP-201ENST00000322344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.85■■□□□ 1.41
PNKP-201ENST00000322344 TADA2BQ86TJ2 420 aa23.85■■□□□ 1.41
PNKP-201ENST00000322344 GRK7Q8WTQ7 553 aa23.85■■□□□ 1.41
PNKP-201ENST00000322344 HAPLN2Q9GZV7 340 aa23.85■■□□□ 1.41
PNKP-201ENST00000322344 MRPL47Q9HD33 250 aaKnown RBP23.85■■□□□ 1.41
PNKP-201ENST00000322344 CNTN6Q9UQ52 1028 aa23.85■■□□□ 1.41
PNKP-201ENST00000322344 ANKRD65E5RJM6 399 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 CAND2O75155 1236 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 KIAA0754O94854 1291 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 PROSCO94903 275 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 ALDH5A1P51649 535 aaPredicted RBP23.84■■□□□ 1.41
PNKP-201ENST00000322344 AP3M2P53677 418 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 WNT7BP56706 349 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 CENPTQ96BT3 561 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 PPANQ9NQ55 473 aaKnown RBP23.84■■□□□ 1.41
PNKP-201ENST00000322344 PTPN22Q9Y2R2 807 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 PPME1Q9Y570 386 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 PCDHB4Q9Y5E5 795 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 ZNF541Q9H0D2 1346 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 CPP00450 1065 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 CALCAP01258 141 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 SHBGP04278 402 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 CLTAP09496 248 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 SLC29A2Q14542 456 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 FAM160B1Q5W0V3 765 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 YTHDF3Q7Z739 585 aaKnown RBP23.84■■□□□ 1.41
PNKP-201ENST00000322344 ABRAQ8N0Z2 381 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 ZNF526Q8TF50 670 aaPredicted RBP23.84■■□□□ 1.41
PNKP-201ENST00000322344 CYFIP2Q96F07 1278 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 FAM84AQ96KN4 292 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 TARS2Q9BW92 718 aaKnown RBP23.84■■□□□ 1.41
PNKP-201ENST00000322344 MTFR1LQ9H019 292 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 STMN4Q9H169 189 aaPredicted RBP23.84■■□□□ 1.41
PNKP-201ENST00000322344 HOMER3Q9NSC5 361 aa23.84■■□□□ 1.41
PNKP-201ENST00000322344 PTPRJQ12913 1337 aa23.83■■□□□ 1.41
PNKP-201ENST00000322344 ADGRA2Q96PE1 1338 aa23.83■■□□□ 1.41
PNKP-201ENST00000322344 LCTP09848 1927 aa23.83■■□□□ 1.41
PNKP-201ENST00000322344 PSTPIP1O43586 416 aa23.83■■□□□ 1.41
PNKP-201ENST00000322344 KCNJ1P48048 391 aa23.83■■□□□ 1.41
PNKP-201ENST00000322344 TARBP2Q15633 366 aaKnown RBP23.83■■□□□ 1.41
PNKP-201ENST00000322344 SEPT14Q6ZU15 432 aa23.83■■□□□ 1.41
PNKP-201ENST00000322344 TRMT10CQ7L0Y3 403 aaKnown RBP23.83■■□□□ 1.41
PNKP-201ENST00000322344 ARMC9Q7Z3E5 817 aa23.83■■□□□ 1.41
PNKP-201ENST00000322344 PHF13Q86YI8 300 aaPredicted RBP23.83■■□□□ 1.41
PNKP-201ENST00000322344 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.83■■□□□ 1.413e-6■■■■■ 38.3
PNKP-201ENST00000322344 ZBTB45Q96K62 511 aaPredicted RBP23.83■■□□□ 1.41
PNKP-201ENST00000322344 APOBEC3GQ9HC16 384 aaKnown RBP23.83■■□□□ 1.41
PNKP-201ENST00000322344 GGA3Q9NZ52 723 aa23.83■■□□□ 1.41
PNKP-201ENST00000322344 SCINQ9Y6U3 715 aa23.83■■□□□ 1.41
PNKP-201ENST00000322344 MYH9P35579 1960 aaKnown RBP23.83■■□□□ 1.4
PNKP-201ENST00000322344 ITIH2P19823 946 aa23.83■■□□□ 1.4
PNKP-201ENST00000322344 GNA15P30679 374 aa23.83■■□□□ 1.4
PNKP-201ENST00000322344 NOMO3P69849 1222 aa23.83■■□□□ 1.4
PNKP-201ENST00000322344 SPOPLQ6IQ16 392 aa23.83■■□□□ 1.4
PNKP-201ENST00000322344 LBX2Q6XYB7 198 aa23.83■■□□□ 1.4
PNKP-201ENST00000322344 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.83■■□□□ 1.4
PNKP-201ENST00000322344 TRPM4Q8TD43 1214 aa23.83■■□□□ 1.4
PNKP-201ENST00000322344 DDX27Q96GQ7 796 aaKnown RBP23.83■■□□□ 1.4
PNKP-201ENST00000322344 SEMA4AQ9H3S1 761 aa23.83■■□□□ 1.4
PNKP-201ENST00000322344 SSC5DA1L4H1 1573 aa23.82■■□□□ 1.4
PNKP-201ENST00000322344 DCDC2CA8MYV0 355 aa23.82■■□□□ 1.4
PNKP-201ENST00000322344 MEFVO15553 781 aaPredicted RBP23.82■■□□□ 1.4
PNKP-201ENST00000322344 RIPK2O43353 540 aa23.82■■□□□ 1.4
PNKP-201ENST00000322344 ADCY3O60266 1144 aa23.82■■□□□ 1.4
PNKP-201ENST00000322344 AGTP01019 485 aa23.82■■□□□ 1.4
PNKP-201ENST00000322344 UBA1P22314 1058 aaKnown RBP23.82■■□□□ 1.4
PNKP-201ENST00000322344 TMOD1P28289 359 aa23.82■■□□□ 1.4
PNKP-201ENST00000322344 CNTN2Q02246 1040 aa23.82■■□□□ 1.4
PNKP-201ENST00000322344 KRT17Q04695 432 aa23.82■■□□□ 1.4
PNKP-201ENST00000322344 NEDD9Q14511 834 aa23.82■■□□□ 1.4
PNKP-201ENST00000322344 ZPBP2Q6X784 338 aa23.82■■□□□ 1.4
PNKP-201ENST00000322344 ADAM22Q9P0K1 906 aa23.82■■□□□ 1.4
PNKP-201ENST00000322344 ANKFY1Q9P2R3 1169 aa23.82■■□□□ 1.4
PNKP-201ENST00000322344 PPP1R1BQ9UD71 204 aaPredicted RBP23.82■■□□□ 1.4
PNKP-201ENST00000322344 CNTNAP2Q9UHC6 1331 aa23.82■■□□□ 1.4
PNKP-201ENST00000322344 GSTTP1A0A1W2PQM5 241 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 RGS16O15492 202 aaPredicted RBP23.81■■□□□ 1.4
PNKP-201ENST00000322344 GAS8O95995 478 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 NOP14P78316 857 aaKnown RBP23.81■■□□□ 1.4
PNKP-201ENST00000322344 C1QBPQ07021 282 aaKnown RBP23.81■■□□□ 1.4
PNKP-201ENST00000322344 GRM1Q13255 1194 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 PTK6Q13882 451 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms