RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 FAM81BQ96LP2 452 aa16.24■□□□□ 0.19
SPIRE1-201ENST00000309836 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
SPIRE1-201ENST00000309836 DDX23Q9BUQ8 820 aaKnown RBP16.24■□□□□ 0.19
SPIRE1-201ENST00000309836 DCLK3Q9C098 648 aa16.24■□□□□ 0.19
SPIRE1-201ENST00000309836 TAOK3Q9H2K8 898 aa16.24■□□□□ 0.19
SPIRE1-201ENST00000309836 KIAA1586Q9HCI6 787 aa16.24■□□□□ 0.19
SPIRE1-201ENST00000309836 A1CFQ9NQ94 594 aaKnown RBP16.24■□□□□ 0.19
SPIRE1-201ENST00000309836 WHRNQ9P202 907 aa16.24■□□□□ 0.19
SPIRE1-201ENST00000309836 FZD1Q9UP38 647 aa16.24■□□□□ 0.19
SPIRE1-201ENST00000309836 R3HDM2Q9Y2K5 976 aaKnown RBP16.24■□□□□ 0.19
SPIRE1-201ENST00000309836 H0YCG3 227 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 NFKBIEO00221 500 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 RPS12P25398 132 aaKnown RBP16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 IVDP26440 423 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 CHKAP35790 457 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 SLCO1A2P46721 670 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 ACOT2P49753 483 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 ACTN3Q08043 901 aaPredicted RBP16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 AUHQ13825 339 aaKnown RBP16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 PTK6Q13882 451 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 SPRED3Q2MJR0 410 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 WDR44Q5JSH3 913 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 ZBTB41Q5SVQ8 909 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 MIS18BP1Q6P0N0 1132 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 KCNV1Q6PIU1 500 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 TRIM11Q96F44 468 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 CHMP6Q96FZ7 201 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 ZNF317Q96PQ6 595 aaPredicted RBP16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 EFCC1Q9HA90 598 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 LOC285556D6RIA3 1793 aa16.23■□□□□ 0.19
SPIRE1-201ENST00000309836 O00370 1275 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 PROSCO94903 275 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 EDN1P05305 212 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 SLC1A1P43005 524 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 CDR1P51861 262 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 TRMT10CQ7L0Y3 403 aaKnown RBP16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 CROCCP2Q86T23 111 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 CACNA2D3Q8IZS8 1091 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 PLVAPQ9BX97 442 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 CDC42EP4Q9H3Q1 356 aaKnown RBP16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 AS3MTQ9HBK9 375 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 PIM2Q9P1W9 311 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 AGO2Q9UKV8 859 aaKnown RBP16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 RASGRF2O14827 1237 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 PIGRP01833 764 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 TNNI1P19237 187 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 GLRA2P23416 452 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 SSTR3P32745 418 aaPredicted RBP16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 NSFP46459 744 aaKnown RBP16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 TAS2R40P59535 323 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 BPIFB4P59827 614 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 PTP4A2Q12974 167 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 CALCOCO2Q13137 446 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 CUL2Q13617 745 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 PRAMEF18Q5VWM3 479 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 DCAF15Q66K64 600 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 MFSD5Q6N075 450 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 MMS22LQ6ZRQ5 1243 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 CDHR1Q96JP9 859 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 FNBP1Q96RU3 617 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 WRNIP1Q96S55 665 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 JPH2Q9BR39 696 aaPredicted RBP16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 OSBPL7Q9BZF2 842 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 ACAD9Q9H845 621 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 ASIC3Q9UHC3 531 aa16.22■□□□□ 0.19
SPIRE1-201ENST00000309836 ATP2A1O14983 1001 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 HNRNPH1P31943 449 aaKnown RBP16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 POLGP54098 1239 aaPredicted RBP16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 NOMO3P69849 1222 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 DRP2Q13474 957 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 CCDC121Q6ZUS5 278 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 PASD1Q8IV76 773 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 MAIP1Q8WWC4 291 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 KCNN1Q92952 543 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 SNF8Q96H20 258 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 CEP89Q96ST8 783 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 C11orf70Q9BRQ4 267 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 PORCNQ9H237 461 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 PICK1Q9NRD5 415 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 NEU2Q9Y3R4 380 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 PCDHB4Q9Y5E5 795 aa16.21■□□□□ 0.19
SPIRE1-201ENST00000309836 STAM2O75886 525 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 OATP04181 439 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 ITIH2P19823 946 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 ABCD1P33897 745 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 ARL2P36404 184 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 ITGA8P53708 1063 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 FSTL1Q12841 308 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 STRN3Q13033 797 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 KLF1Q13351 362 aaPredicted RBP16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 TRIP13Q15645 432 aaPredicted RBP16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 CCDC38Q502W7 563 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 SCARA3Q6AZY7 606 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 CATSPERGQ6ZRH7 1159 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 SYDE1Q6ZW31 735 aaPredicted RBP16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 ARMC9Q7Z3E5 817 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 CPLX4Q7Z7G2 160 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 ABRAQ8N0Z2 381 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 CGRRF1Q99675 332 aa16.2■□□□□ 0.18
SPIRE1-201ENST00000309836 TARS2Q9BW92 718 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms