RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PLS3P13797 630 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 NPTX2P47972 431 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 MRPS9P82933 396 aaKnown RBP13.45□□□□□ -0.26
RETREG3-201ENST00000309428 Q4G0T1 1027 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 MOB2Q70IA6 237 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 NOP9Q86U38 636 aaKnown RBP13.45□□□□□ -0.26
RETREG3-201ENST00000309428 PALM2Q8IXS6 379 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 DAW1Q8N136 415 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 TRAPPC12Q8WVT3 735 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 SEMA4DQ92854 862 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 POLR3FQ9H1D9 316 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-201ENST00000309428 AIPL1Q9NZN9 384 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 C15orf41Q9Y2V0 281 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 COPS2P61201 443 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 PPP2R5CQ13362 524 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 ASTE1Q2TB18 679 aaPredicted RBP13.44□□□□□ -0.26
RETREG3-201ENST00000309428 BBS9Q3SYG4 887 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 ARMC3Q5W041 872 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 SLC30A9Q6PML9 568 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 ANKMY2Q8IV38 441 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 PARD3BQ8TEW8 1205 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 CYP3A7-CYP3A51PA0A087WV96 503 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 SGK1O00141 431 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 NOP56O00567 594 aaKnown RBP13.44□□□□□ -0.26
RETREG3-201ENST00000309428 GYG2O15488 501 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 WEE2P0C1S8 567 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 ZCCHC18P0CG32 403 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 KRT10P13645 584 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 RWDD2BP57060 319 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 PPP2R5DQ14738 602 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 SMTNL2Q2TAL5 461 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 MKL1Q969V6 931 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 MCM8Q9UJA3 840 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 FEM1BQ9UK73 627 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 CCDC88AQ3V6T2 1871 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.44□□□□□ -0.26
RETREG3-201ENST00000309428 MAPK13O15264 365 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 PYGMP11217 842 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 CREB1P16220 341 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 NSFP46459 744 aaKnown RBP13.44□□□□□ -0.26
RETREG3-201ENST00000309428 ATP13A4Q4VNC1 1196 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 ZBTB41Q5SVQ8 909 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 FLAD1Q8NFF5 587 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 CCHCR1Q8TD31 782 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 ABTB1Q969K4 478 aaPredicted RBP13.44□□□□□ -0.26
RETREG3-201ENST00000309428 ABCA3Q99758 1704 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 POLR3CQ9BUI4 534 aaPredicted RBP13.44□□□□□ -0.26
RETREG3-201ENST00000309428 UBN1Q9NPG3 1134 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 MAGED2Q9UNF1 606 aaPredicted RBP13.44□□□□□ -0.26
RETREG3-201ENST00000309428 SLC4A7Q9Y6M7 1214 aa13.44□□□□□ -0.26
RETREG3-201ENST00000309428 TIAM2Q8IVF5 1701 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 DRD4P21917 467 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 CDK17Q00537 523 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 NT5DC3Q86UY8 548 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 KIFAP3Q92845 792 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 CCDC124Q96CT7 223 aaKnown RBP13.43□□□□□ -0.26
RETREG3-201ENST00000309428 APOL6Q9BWW8 343 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 SMYD3Q9H7B4 428 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 ZWILCHQ9H900 591 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 ATP6V0A4Q9HBG4 840 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 PCSK1NQ9UHG2 260 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 KAT6AQ92794 2004 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 WDR64B1ANS9 1081 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 K7ERI5 159 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 PODXLO00592 558 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 PPP1R12AO14974 1030 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-201ENST00000309428 CCNE2O96020 404 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 AGTP01019 485 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 ESRRAP11474 423 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-201ENST00000309428 FSTL1Q12841 308 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 ORC2Q13416 577 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-201ENST00000309428 Q3C1V9 767 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 GJC2Q5T442 439 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-201ENST00000309428 GMCL1P1Q8NEA9 526 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 BSNDQ8WZ55 320 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 OTUD5Q96G74 571 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 TUFT1Q9NNX1 390 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 MARCOQ9UEW3 520 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-201ENST00000309428 ZFP69BQ9UJL9 534 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 MRPL42Q9Y6G3 142 aaKnown RBP13.43□□□□□ -0.26
RETREG3-201ENST00000309428 MYH7BA7E2Y1 1941 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 O00370 1275 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 GNAT1P11488 350 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 MFAP3P55082 362 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 GPC5P78333 572 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 PRKCEQ02156 737 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 MAPK7Q13164 816 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 R3HDM1Q15032 1099 aaKnown RBP13.43□□□□□ -0.26
RETREG3-201ENST00000309428 CDO1Q16878 200 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 GBP7Q8N8V2 638 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-201ENST00000309428 PCDHB18PQ96TA0 734 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 EDEM3Q9BZQ6 932 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 SIX2Q9NPC8 291 aa13.43□□□□□ -0.26
RETREG3-201ENST00000309428 SYNJ2BP-COX16A0A087WUM0 186 aa13.42□□□□□ -0.26
RETREG3-201ENST00000309428 CCDC195A0A1B0GUA6 201 aa13.42□□□□□ -0.26
RETREG3-201ENST00000309428 CBX6O95503 412 aa13.42□□□□□ -0.26
RETREG3-201ENST00000309428 KRT16P08779 473 aa13.42□□□□□ -0.26
RETREG3-201ENST00000309428 RRM1P23921 792 aa13.42□□□□□ -0.26
RETREG3-201ENST00000309428 HNRNPH3P31942 346 aaKnown RBP13.42□□□□□ -0.26
RETREG3-201ENST00000309428 RPL21P46778 160 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms