RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 GLIS3Q8NEA6 775 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 ACRBPQ8NEB7 543 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 IL17REQ8NFR9 667 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 PHKBQ93100 1093 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 FKBP10Q96AY3 582 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 ZNF653Q96CK0 615 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 FAM122AQ96E09 287 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 FEM1CQ96JP0 617 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 TRAPPC9Q96Q05 1148 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 MTA3Q9BTC8 594 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 EHMT1Q9H9B1 1298 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 IL21Q9HBE4 155 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 SPC25Q9HBM1 224 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 SERINC1Q9NRX5 453 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 TJP2Q9UDY2 1190 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 A2MP01023 1474 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 GPRASP1Q5JY77 1395 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 STK25O00506 426 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 CYP27B1O15528 508 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 MAP3K13O43283 966 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 GDF11O95390 407 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 C6P13671 934 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 ALOX12P18054 663 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 NOS3P29474 1203 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 HOXC12P31275 282 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 IL13P35225 146 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 MSH2P43246 934 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 CD83Q01151 205 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 CYP4F3Q08477 520 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 GPS2Q13227 327 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 KCNAB2Q13303 367 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 UBE2SQ16763 222 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 CDO1Q16878 200 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 CCDC93Q567U6 631 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 DDX53Q86TM3 631 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 COMTD1Q86VU5 262 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 ZSCAN18Q8TBC5 510 aaPredicted RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 SLC26A7Q8TE54 656 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 AIFM3Q96NN9 605 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 LINC00597Q9H2U6 94 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 LGR6Q9HBX8 967 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 LANCL2Q9NS86 450 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 TCEAL9Q9UHQ7 104 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 RASAL2Q9UJF2 1139 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 TPX2Q9ULW0 747 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 LRRFIP2Q9Y608 721 aaKnown RBP1.38□□□□□ -2.19
CEP290-201ENST00000309041 AP4B1Q9Y6B7 739 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 ZMYM6O95789 1325 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 WDR17Q8IZU2 1322 aa1.38□□□□□ -2.19
CEP290-201ENST00000309041 COL3A1P02461 1466 aaPredicted RBP1.37□□□□□ -2.19
CEP290-201ENST00000309041 L7N2F9 121 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 POLR1CO15160 346 aaPredicted RBP1.37□□□□□ -2.19
CEP290-201ENST00000309041 PPM1DO15297 605 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 SLC16A7O60669 478 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 SCG5P05408 212 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 F3P13726 295 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 TYMPP19971 482 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 CPT2P23786 658 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 GIFP27352 417 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 CIITAP33076 1130 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 MAP2K2P36507 400 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 POLD2P49005 469 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 AARSP49588 968 aaKnown RBP eCLIP1.37□□□□□ -2.194e-6■■■□□ 17.5
CEP290-201ENST00000309041 SPOCK1Q08629 439 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 EPHA7Q15375 998 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 JAKMIP3Q5VZ66 844 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 KIAA1211LQ6NV74 962 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 OTUD6AQ7L8S5 288 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 THNSL1Q8IYQ7 743 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 ZNF808Q8N4W9 903 aaPredicted RBP1.37□□□□□ -2.19
CEP290-201ENST00000309041 SPATA22Q8NHS9 363 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 HDAC7Q8WUI4 952 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 NANOS1Q8WY41 292 aaKnown RBP1.37□□□□□ -2.19
CEP290-201ENST00000309041 RNF31Q96EP0 1072 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 PTCD3Q96EY7 689 aaKnown RBP1.37□□□□□ -2.19
CEP290-201ENST00000309041 CCDC138Q96M89 665 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 GAD1Q99259 594 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 VPS16Q9H269 839 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 AGO4Q9HCK5 861 aaKnown RBP1.37□□□□□ -2.19
CEP290-201ENST00000309041 DMGDHQ9UI17 866 aaKnown RBP1.37□□□□□ -2.19
CEP290-201ENST00000309041 MAN1B1Q9UKM7 699 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 BLOC1S6Q9UL45 172 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 KCNH3Q9ULD8 1083 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 NWD2Q9ULI1 1742 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 TMEM238LA0A1B0GVL6 79 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 ARHGEF35A5YM69 484 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 TOR1BO14657 336 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 U2SURPO15042 1029 aaKnown RBP1.37□□□□□ -2.19
CEP290-201ENST00000309041 ADAMTS4O75173 837 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 SLITRK3O94933 977 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 LUC7L3O95232 432 aaKnown RBP1.37□□□□□ -2.19
CEP290-201ENST00000309041 SEC24AO95486 1093 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 FAM163BP0C2L3 166 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 APEHP13798 732 aaKnown RBP1.37□□□□□ -2.19
CEP290-201ENST00000309041 ABCB4P21439 1286 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 SMTNP53814 917 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 PMS1P54277 932 aaKnown RBP1.37□□□□□ -2.19
CEP290-201ENST00000309041 MLLT6P55198 1093 aaPredicted RBP1.37□□□□□ -2.19
CEP290-201ENST00000309041 SSTP61278 116 aa1.37□□□□□ -2.19
CEP290-201ENST00000309041 GOLGA8FQ08AF8 430 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms