RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ZNF397Q8NF99 534 aaPredicted RBP5.5□□□□□ -1.53
CKS1B-201ENST00000308987 KIF18AQ8NI77 898 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 CYB5D2Q8WUJ1 264 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 FRMD6Q96NE9 622 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 MMP19Q99542 508 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 CRNKL1Q9BZJ0 848 aaKnown RBP5.5□□□□□ -1.53
CKS1B-201ENST00000308987 PRDM12Q9H4Q4 367 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 NRBP1Q9UHY1 535 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 DDX41Q9UJV9 622 aaKnown RBP5.5□□□□□ -1.53
CKS1B-201ENST00000308987 CNOT11Q9UKZ1 510 aaKnown RBP5.5□□□□□ -1.53
CKS1B-201ENST00000308987 GNEQ9Y223 722 aaKnown RBP5.5□□□□□ -1.53
CKS1B-201ENST00000308987 TLR6Q9Y2C9 796 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 TAF6LQ9Y6J9 622 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 LAMA4Q16363 1823 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 KIAA1217Q5T5P2 1943 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 GRIN2DO15399 1336 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 UMODL1Q5DID0 1318 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 SHISA3A0PJX4 238 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 CCDC69A6NI79 296 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 ABLIM1O14639 778 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 FFAR3O14843 346 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 CBFA2T2O43439 604 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 SLC25A27O95847 323 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 CD4P01730 458 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 HSPD1P10809 573 aaKnown RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 SKILP12757 684 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 AKR1A1P14550 325 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 CSF2RAP15509 400 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 PNLIPP16233 465 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 CMA1P23946 247 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 GNA15P30679 374 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 CYP2C18P33260 490 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 ME1P48163 572 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 SLURP1P55000 103 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 CCZ1BP86790 482 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 CCZ1P86791 482 aaPredicted RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 RPL6Q02878 288 aaKnown RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 FPGSQ05932 587 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 LRMPQ12912 555 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 ZRSR1Q15695 479 aaKnown RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 CCDC144BQ3MJ40 725 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 MFSD5Q6N075 450 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 CTR9Q6PD62 1173 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 MAMDC4Q6UXC1 1216 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 AGMOQ6ZNB7 445 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 C11orf57Q6ZUT1 292 aaPredicted RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 STOX1Q6ZVD7 989 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 ZNF365Q70YC5 407 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 RNF180Q86T96 592 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 DHX40Q8IX18 779 aaKnown RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 CCDC144CPQ8IYA2 1237 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 CCAR2Q8N163 923 aaKnown RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 FSIP1Q8NA03 581 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 SLC16A11Q8NCK7 471 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 LINC00301Q8NCQ3 95 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 FBXO18Q8NFZ0 1043 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 TIFAQ96CG3 184 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 TCEANC2Q96MN5 208 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 USP28Q96RU2 1077 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 DNAJC2Q99543 621 aaKnown RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 SRRTQ9BXP5 876 aaKnown RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 PUS7LQ9H0K6 701 aaKnown RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 UPF3AQ9H1J1 476 aaKnown RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 GOLPH3LQ9H4A5 285 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 L2HGDHQ9H9P8 463 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 SWAP70Q9UH65 585 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 DIS3Q9Y2L1 958 aaKnown RBP5.49□□□□□ -1.53
CKS1B-201ENST00000308987 ZNF318Q5VUA4 2279 aa5.49□□□□□ -1.53
CKS1B-201ENST00000308987 IGKV6D-41A0A0C4DH26 115 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.48□□□□□ -1.53
CKS1B-201ENST00000308987 ARVCFO00192 962 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 SPTLC2O15270 562 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 ATP8B1O43520 1251 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 PPP6R2O75170 966 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 DUSP11O75319 330 aaKnown RBP5.48□□□□□ -1.53
CKS1B-201ENST00000308987 CDKL5O76039 1030 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 SLU7O95391 586 aaKnown RBP5.48□□□□□ -1.53
CKS1B-201ENST00000308987 NDUFB10O96000 172 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 ASGR1P07306 291 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 SLC3A2P08195 630 aaKnown RBP5.48□□□□□ -1.53
CKS1B-201ENST00000308987 TPM1P09493 284 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 MYOGP15173 224 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 CST5P28325 142 aaPredicted RBP5.48□□□□□ -1.53
CKS1B-201ENST00000308987 GBP1P32455 592 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 GJA9P57773 515 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 ERVFRD-1P60508 538 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 BEX3Q00994 111 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 CNTN2Q02246 1040 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 APOBRQ0VD83 1088 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 ACVR2BQ13705 512 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 SLC39A14Q15043 492 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 STK38Q15208 465 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 IMMTQ16891 758 aaKnown RBP5.48□□□□□ -1.53
CKS1B-201ENST00000308987 CT47A1Q5JQC4 288 aaPredicted RBP5.48□□□□□ -1.53
CKS1B-201ENST00000308987 UBXN11Q5T124 520 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 SNRNP48Q6IEG0 339 aaKnown RBP5.48□□□□□ -1.53
CKS1B-201ENST00000308987 TMED8Q6PL24 325 aaPredicted RBP5.48□□□□□ -1.53
CKS1B-201ENST00000308987 SYNE3Q6ZMZ3 975 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms