RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 KAT5Q92993 513 aa18.86■□□□□ 0.61
KRT28-201ENST00000306658 ADAMTS1Q9UHI8 967 aa18.86■□□□□ 0.61
KRT28-201ENST00000306658 DERAQ9Y315 318 aa18.86■□□□□ 0.61
KRT28-201ENST00000306658 RBAK-RBAKDNI3L0D1 243 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 MEFVO15553 781 aaPredicted RBP18.85■□□□□ 0.61
KRT28-201ENST00000306658 ASS1P00966 412 aaKnown RBP18.85■□□□□ 0.61
KRT28-201ENST00000306658 USP8P40818 1118 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 NOP14P78316 857 aaKnown RBP18.85■□□□□ 0.61
KRT28-201ENST00000306658 CYP27A1Q02318 531 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 GFPT1Q06210 699 aaPredicted RBP18.85■□□□□ 0.61
KRT28-201ENST00000306658 NFX1Q12986 1120 aaKnown RBP18.85■□□□□ 0.61
KRT28-201ENST00000306658 MTFR1Q15390 333 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 ZNF662Q6ZS27 426 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 DHX38Q92620 1227 aaKnown RBP18.85■□□□□ 0.61
KRT28-201ENST00000306658 TAF4BQ92750 862 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 IFIH1Q9BYX4 1025 aaKnown RBP18.85■□□□□ 0.61
KRT28-201ENST00000306658 LZTFL1Q9NQ48 299 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 R3HCC1Q9Y3T6 440 aaKnown RBP18.85■□□□□ 0.61
KRT28-201ENST00000306658 PCDHA13Q9Y5I0 950 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 MYCP01106 439 aaPredicted RBP18.85■□□□□ 0.61
KRT28-201ENST00000306658 MYL6P60660 151 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 BMS1Q14692 1282 aaKnown RBP18.85■□□□□ 0.61
KRT28-201ENST00000306658 TRIM71Q2Q1W2 868 aaKnown RBP18.85■□□□□ 0.61
KRT28-201ENST00000306658 UBXN11Q5T124 520 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 USP38Q8NB14 1042 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 SNX27Q96L92 541 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 TSPAN18Q96SJ8 248 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 TRPV6Q9H1D0 765 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 NXF3Q9H4D5 531 aaKnown RBP18.85■□□□□ 0.61
KRT28-201ENST00000306658 OGDHLQ9ULD0 1010 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 SQORQ9Y6N5 450 aa18.85■□□□□ 0.61
KRT28-201ENST00000306658 ZNF263O14978 683 aa18.84■□□□□ 0.61
KRT28-201ENST00000306658 KRT86O43790 486 aa18.84■□□□□ 0.61
KRT28-201ENST00000306658 KRT19P08727 400 aa18.84■□□□□ 0.61
KRT28-201ENST00000306658 ZSCAN20P17040 1043 aaPredicted RBP18.84■□□□□ 0.61
KRT28-201ENST00000306658 MAGEA1P43355 309 aa18.84■□□□□ 0.61
KRT28-201ENST00000306658 VAV2P52735 878 aa18.84■□□□□ 0.61
KRT28-201ENST00000306658 CUL2Q13617 745 aa18.84■□□□□ 0.61
KRT28-201ENST00000306658 FBXO47Q5MNV8 452 aa18.84■□□□□ 0.61
KRT28-201ENST00000306658 C10orf76Q5T2E6 689 aa18.84■□□□□ 0.61
KRT28-201ENST00000306658 SPOPLQ6IQ16 392 aa18.84■□□□□ 0.61
KRT28-201ENST00000306658 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.84■□□□□ 0.61
KRT28-201ENST00000306658 KIF12Q96FN5 646 aa18.84■□□□□ 0.61
KRT28-201ENST00000306658 APOBEC3GQ9HC16 384 aaKnown RBP18.84■□□□□ 0.61
KRT28-201ENST00000306658 HES2Q9Y543 173 aa18.84■□□□□ 0.61
KRT28-201ENST00000306658 NUB1Q9Y5A7 615 aa18.84■□□□□ 0.61
KRT28-201ENST00000306658 DNAH12Q6ZR08 3092 aa18.84■□□□□ 0.61
KRT28-201ENST00000306658 A0A087X0T9 212 aa18.83■□□□□ 0.61
KRT28-201ENST00000306658 FAM228BP0C875 321 aa18.83■□□□□ 0.61
KRT28-201ENST00000306658 KIF5AQ12840 1032 aa18.83■□□□□ 0.61
KRT28-201ENST00000306658 PAK2Q13177 524 aa18.83■□□□□ 0.61
KRT28-201ENST00000306658 ZNF699Q32M78 642 aa18.83■□□□□ 0.61
KRT28-201ENST00000306658 SMYD5Q6GMV2 418 aa18.83■□□□□ 0.61
KRT28-201ENST00000306658 ALKAL1Q6UXT8 129 aa18.83■□□□□ 0.61
KRT28-201ENST00000306658 CTU1Q7Z7A3 348 aaKnown RBP18.83■□□□□ 0.61
KRT28-201ENST00000306658 HACE1Q8IYU2 909 aa18.83■□□□□ 0.61
KRT28-201ENST00000306658 C1orf127Q8N9H9 656 aa18.83■□□□□ 0.61
KRT28-201ENST00000306658 ELMO3Q96BJ8 720 aa18.83■□□□□ 0.61
KRT28-201ENST00000306658 TSGA10Q9BZW7 698 aa18.83■□□□□ 0.61
KRT28-201ENST00000306658 ITGA11Q9UKX5 1188 aa18.83■□□□□ 0.61
KRT28-201ENST00000306658 IPPQ9Y573 584 aa18.83■□□□□ 0.61
KRT28-201ENST00000306658 KIF5CO60282 957 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 RECQL4O94761 1208 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 CKBP12277 381 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 KRT5P13647 590 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 ATICP31939 592 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 CDK7P50613 346 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 ETF1P62495 437 aaKnown RBP18.82■□□□□ 0.6
KRT28-201ENST00000306658 CCDC122Q5T0U0 273 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 ZNF618Q5T7W0 954 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 FAXDC2Q96IV6 333 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 APOL6Q9BWW8 343 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 NIF3L1Q9GZT8 377 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 AGO3Q9H9G7 860 aaKnown RBP18.82■□□□□ 0.6
KRT28-201ENST00000306658 ERVK-5Q9HDB9 667 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 DPP3Q9NY33 737 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 CNTN3Q9P232 1028 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 PARP2Q9UGN5 583 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 PADI3Q9ULW8 664 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 CYP26A1O43174 497 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 ITGB3P05106 788 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 GHRP10912 638 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 TNFAIP3P21580 790 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 AKAP5P24588 427 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 ARHGAP25P42331 645 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 BPIFB4P59827 614 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 LPIN1Q14693 890 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 SMG8Q8ND04 991 aaKnown RBP18.82■□□□□ 0.6
KRT28-201ENST00000306658 ARID3AQ99856 593 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 XYLT2Q9H1B5 865 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 SIX4Q9UIU6 781 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 PCDHB2Q9Y5E7 798 aa18.82■□□□□ 0.6
KRT28-201ENST00000306658 RALGAPA2Q2PPJ7 1873 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 A0A0U1RQJ8 604 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 XPOTO43592 962 aaKnown RBP18.81■□□□□ 0.6
KRT28-201ENST00000306658 CD52P31358 61 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 PDE6CP51160 858 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 RBP5P82980 135 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 NAB2Q15742 525 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 ALKBH5Q6P6C2 394 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms