RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 BRCC3P46736 316 aa28.79■■■□□ 2.2
CDKN2A-201ENST00000304494 SLC39A4Q6P5W5 647 aa28.79■■■□□ 2.2
CDKN2A-201ENST00000304494 PLCD3Q8N3E9 789 aa28.79■■■□□ 2.2
CDKN2A-201ENST00000304494 KIF12Q96FN5 646 aa28.79■■■□□ 2.2
CDKN2A-201ENST00000304494 TNMDQ9H2S6 317 aa28.79■■■□□ 2.2
CDKN2A-201ENST00000304494 OLFML3Q9NRN5 406 aa28.79■■■□□ 2.2
CDKN2A-201ENST00000304494 MTRRQ9UBK8 725 aa28.79■■■□□ 2.2
CDKN2A-201ENST00000304494 EXOC7Q9UPT5 735 aa28.79■■■□□ 2.2
CDKN2A-201ENST00000304494 PAPLNO95428 1278 aa28.78■■■□□ 2.2
CDKN2A-201ENST00000304494 TKTP29401 623 aaKnown RBP28.78■■■□□ 2.2
CDKN2A-201ENST00000304494 PKP1Q13835 747 aa28.78■■■□□ 2.2
CDKN2A-201ENST00000304494 ENOX2Q16206 610 aaKnown RBP28.78■■■□□ 2.2
CDKN2A-201ENST00000304494 CD302Q8IX05 232 aa28.78■■■□□ 2.2
CDKN2A-201ENST00000304494 ZDHHC14Q8IZN3 488 aa28.78■■■□□ 2.2
CDKN2A-201ENST00000304494 ACSF2Q96CM8 615 aaPredicted RBP28.78■■■□□ 2.2
CDKN2A-201ENST00000304494 TUBGCP4Q9UGJ1 667 aa28.78■■■□□ 2.2
CDKN2A-201ENST00000304494 FBXW11Q9UKB1 542 aa28.78■■■□□ 2.2
CDKN2A-201ENST00000304494 UBQLN1Q9UMX0 589 aaKnown RBP28.78■■■□□ 2.2
CDKN2A-201ENST00000304494 BACE2Q9Y5Z0 518 aa28.78■■■□□ 2.2
CDKN2A-201ENST00000304494 STYXL1Q9Y6J8 313 aa28.78■■■□□ 2.2
CDKN2A-201ENST00000304494 FRMD3A2A2Y4 597 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 ANKRD63C9JTQ0 380 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 I3L4J1 428 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 SYN3O14994 580 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 RFPL2O75678 378 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 PPP1R37O75864 691 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 MYBP10242 640 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 CYP3A5P20815 502 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 ALCAMQ13740 583 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 PTPN21Q16825 1174 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 ZBTB41Q5SVQ8 909 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 LIN9Q5TKA1 542 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 ADALQ6DHV7 355 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 SHC4Q6S5L8 630 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 IQUBQ8NA54 791 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 FEZF2Q8TBJ5 459 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 SMG7Q92540 1137 aaKnown RBP28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 STRA6Q9BX79 667 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 PANK4Q9NVE7 773 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 CPSF3Q9UKF6 684 aaKnown RBP28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 PCDHB13Q9Y5F0 798 aa28.77■■■□□ 2.2
CDKN2A-201ENST00000304494 LACTBL1A8MY62 500 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 GCNT3O95395 438 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 ADRB2P07550 413 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 ME1P48163 572 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 ZXDAP98168 799 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 AMPD3Q01432 767 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 RAB33AQ14088 237 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 POSTNQ15063 836 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 E2F4Q16254 413 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 L1TD1Q5T7N2 865 aaKnown RBP28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 OTOP3Q7RTS5 596 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 CCDC65Q8IXS2 484 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 STAMQ92783 540 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 ACCSQ96QU6 501 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 PIDD1Q9HB75 910 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 TBC1D7Q9P0N9 293 aa28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 AGO2Q9UKV8 859 aaKnown RBP28.76■■■□□ 2.19
CDKN2A-201ENST00000304494 ZMYND10O75800 440 aa28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 LRPAP1P30533 357 aa28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 MCM4P33991 863 aa28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 OR1D2P34982 312 aa28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 SPAG1Q07617 926 aa28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 ZBTB6Q15916 424 aa28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 DHX58Q96C10 678 aa28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 ZNF707Q96C28 371 aaPredicted RBP28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 SUSD3Q96L08 255 aa28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 PRKD2Q9BZL6 878 aa28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 WDR6Q9NNW5 1121 aaKnown RBP28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 KBTBD4Q9NVX7 518 aa28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 CDY1Q9Y6F8 540 aa28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 VWA8A3KMH1 1905 aa28.75■■■□□ 2.19
CDKN2A-201ENST00000304494 PDCD11Q14690 1871 aaKnown RBP28.74■■■□□ 2.19
CDKN2A-201ENST00000304494 DENND4AQ7Z401 1863 aa28.74■■■□□ 2.19
CDKN2A-201ENST00000304494 ADAM12O43184 909 aa28.74■■■□□ 2.19
CDKN2A-201ENST00000304494 POU5F1Q01860 360 aaKnown RBP28.74■■■□□ 2.19
CDKN2A-201ENST00000304494 VARS2Q5ST30 1063 aaKnown RBP28.74■■■□□ 2.19
CDKN2A-201ENST00000304494 AXDND1Q5T1B0 1012 aaPredicted RBP28.74■■■□□ 2.19
CDKN2A-201ENST00000304494 POMGNT1Q8WZA1 660 aa28.74■■■□□ 2.19
CDKN2A-201ENST00000304494 FAM212AQ96EL1 285 aa28.74■■■□□ 2.19
CDKN2A-201ENST00000304494 FAM13BQ9NYF5 915 aa28.74■■■□□ 2.19
CDKN2A-201ENST00000304494 CLUHO75153 1309 aa28.73■■■□□ 2.19
CDKN2A-201ENST00000304494 TISP43B9A030 160 aa28.73■■■□□ 2.19
CDKN2A-201ENST00000304494 H7C4K7 107 aa28.73■■■□□ 2.19
CDKN2A-201ENST00000304494 HNRNPA1P09651 372 aaKnown RBP eCLIP28.73■■■□□ 2.19
CDKN2A-201ENST00000304494 ACOT2P49753 483 aa28.73■■■□□ 2.19
CDKN2A-201ENST00000304494 DNM1Q05193 864 aaKnown RBP28.73■■■□□ 2.19
CDKN2A-201ENST00000304494 MAGEF1Q9HAY2 307 aa28.73■■■□□ 2.19
CDKN2A-201ENST00000304494 PCDHA7Q9UN72 937 aa28.73■■■□□ 2.19
CDKN2A-201ENST00000304494 DERAQ9Y315 318 aa28.73■■■□□ 2.19
CDKN2A-201ENST00000304494 MTCL1Q9Y4B5 1905 aaKnown RBP28.73■■■□□ 2.19
CDKN2A-201ENST00000304494 C8AP07357 584 aa28.72■■■□□ 2.19
CDKN2A-201ENST00000304494 HOXA9P31269 272 aa28.72■■■□□ 2.19
CDKN2A-201ENST00000304494 PPM1LQ5SGD2 360 aa28.72■■■□□ 2.19
CDKN2A-201ENST00000304494 SLC8B1Q6J4K2 584 aa28.72■■■□□ 2.19
CDKN2A-201ENST00000304494 TRIM67Q6ZTA4 783 aa28.72■■■□□ 2.19
CDKN2A-201ENST00000304494 STXBP4Q6ZWJ1 553 aa28.72■■■□□ 2.19
CDKN2A-201ENST00000304494 RTL10Q7L3V2 364 aa28.72■■■□□ 2.19
CDKN2A-201ENST00000304494 APPL2Q8NEU8 664 aa28.72■■■□□ 2.19
CDKN2A-201ENST00000304494 BEST2Q8NFU1 509 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms