RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 SIP14410 1827 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 TET1Q8NFU7 2136 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 ANO9A1A5B4 782 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 SYCE3A1L190 88 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 GRXCR1A8MXD5 290 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 PIRO00625 290 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 NRP1O14786 923 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 B3GAT3O94766 335 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 DDHD2O94830 711 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 EFEMP2O95967 443 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 TMEM191BP0C7N4 346 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 AARSP49588 968 aaKnown RBP eCLIP9.56□□□□□ -0.88
VPREB1-201ENST00000302273 RABGGTBP53611 331 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 TPM4P67936 248 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 MYL5Q02045 173 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 MYO1EQ12965 1108 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 PTPROQ16827 1216 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 SGSM1Q2NKQ1 1148 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 ZACNQ401N2 412 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 EPC2Q52LR7 807 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 ZBTB41Q5SVQ8 909 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 SPOUT1Q5T280 376 aaKnown RBP9.56□□□□□ -0.88
VPREB1-201ENST00000302273 JADE1Q6IE81 842 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 FAM117BQ6P1L5 589 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 LRSAM1Q6UWE0 723 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 DPH6Q7L8W6 267 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 ZNF280BQ86YH2 543 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 SLC39A11Q8N1S5 342 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 COLGALT1Q8NBJ5 622 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 RDH13Q8NBN7 331 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 TMEM169Q96HH4 297 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 IGSF21Q96ID5 467 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 LRCH3Q96II8 777 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 FAM81BQ96LP2 452 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 ZNF560Q96MR9 790 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 CGRRF1Q99675 332 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 IKZF4Q9H2S9 585 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 ZNF576Q9H609 170 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 VRTNQ9H8Y1 702 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 PDE11AQ9HCR9 933 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 NGRNQ9NPE2 291 aaKnown RBP9.56□□□□□ -0.88
VPREB1-201ENST00000302273 MIOSQ9NXC5 875 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 DPP3Q9NY33 737 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 MAGEC2Q9UBF1 373 aaPredicted RBP9.56□□□□□ -0.88
VPREB1-201ENST00000302273 ADAM28Q9UKQ2 775 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 DSEQ9UL01 958 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 PLAGL2Q9UPG8 496 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 CTNND2Q9UQB3 1225 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 YBX2Q9Y2T7 364 aaKnown RBP9.56□□□□□ -0.88
VPREB1-201ENST00000302273 COQ4Q9Y3A0 265 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 IRAK3Q9Y616 596 aa9.56□□□□□ -0.88
VPREB1-201ENST00000302273 SF3B1O75533 1304 aaKnown RBP eCLIP9.56□□□□□ -0.88
VPREB1-201ENST00000302273 GTPBP10A4D1E9 387 aaKnown RBP9.55□□□□□ -0.88
VPREB1-201ENST00000302273 GOLGA8IPA6NC78 632 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 TRIM49BA6NDI0 452 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 GOLGA8JA6NMD2 632 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 SYN3O14994 580 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 MEFVO15553 781 aaPredicted RBP9.55□□□□□ -0.88
VPREB1-201ENST00000302273 ZC3H11AO75152 810 aaKnown RBP eCLIP9.55□□□□□ -0.88
VPREB1-201ENST00000302273 TADA2AO75478 443 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 C4BPAP04003 597 aaKnown RBP9.55□□□□□ -0.88
VPREB1-201ENST00000302273 TPM2P07951 284 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 NFICP08651 508 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 DLATP10515 647 aaKnown RBP9.55□□□□□ -0.88
VPREB1-201ENST00000302273 CASP4P49662 377 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 AFF1P51825 1210 aaKnown RBP9.55□□□□□ -0.88
VPREB1-201ENST00000302273 TFAMQ00059 246 aaKnown RBP9.55□□□□□ -0.88
VPREB1-201ENST00000302273 CREMQ03060 361 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 CCDC40Q4G0X9 1142 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 SEZ6Q53EL9 994 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 ZNF697Q5TEC3 545 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 C9orf57Q5W0N0 161 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 KRT39Q6A163 491 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 C15orf39Q6ZRI6 1047 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 TRAPPC11Q7Z392 1133 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 TMCO2Q7Z6W1 182 aaPredicted RBP9.55□□□□□ -0.88
VPREB1-201ENST00000302273 TRIM59Q8IWR1 403 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 RNF168Q8IYW5 571 aaPredicted RBP9.55□□□□□ -0.88
VPREB1-201ENST00000302273 TTC39CQ8N584 583 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 CCDC150Q8NCX0 1101 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 APPL2Q8NEU8 664 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 FBXO22Q8NEZ5 403 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 CCDC127Q96BQ5 260 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 FAM212AQ96EL1 285 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 RBSNQ9H1K0 784 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 TMEM8AQ9HCN3 771 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.55□□□□□ -0.88
VPREB1-201ENST00000302273 GDAP2Q9NXN4 497 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 MAFFQ9ULX9 164 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 NFE2L3Q9Y4A8 694 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.55□□□□□ -0.88
VPREB1-201ENST00000302273 SCN5AQ14524 2016 aa9.55□□□□□ -0.88
VPREB1-201ENST00000302273 LCHNA4D1U4 455 aa9.54□□□□□ -0.88
VPREB1-201ENST00000302273 BECN2A8MW95 431 aa9.54□□□□□ -0.88
VPREB1-201ENST00000302273 M0QZQ0 153 aa9.54□□□□□ -0.88
VPREB1-201ENST00000302273 PODXLO00592 558 aa9.54□□□□□ -0.88
VPREB1-201ENST00000302273 NCK2O43639 380 aa9.54□□□□□ -0.88
VPREB1-201ENST00000302273 FGF18O76093 207 aa9.54□□□□□ -0.88
VPREB1-201ENST00000302273 P4HA1P13674 534 aa9.54□□□□□ -0.88
VPREB1-201ENST00000302273 CTNNB1P35222 781 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms