RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 RSBN1LQ6PCB5 846 aaPredicted RBP14.91□□□□□ -0.02
SDC2-201ENST00000302190 FAM160B2Q86V87 743 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 HIPK4Q8NE63 616 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 SNF8Q96H20 258 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 MXRA8Q9BRK3 442 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 POLR3FQ9H1D9 316 aaPredicted RBP14.91□□□□□ -0.02
SDC2-201ENST00000302190 MRPL47Q9HD33 250 aaKnown RBP14.91□□□□□ -0.02
SDC2-201ENST00000302190 RNF8O76064 485 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 UBOX5O94941 541 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 WEE2P0C1S8 567 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 MYBL1P10243 752 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 CYP11B1P15538 503 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 GBP1P32455 592 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 MSH2P43246 934 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 BPIFB4P59827 614 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 PSMC5P62195 406 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 PPP6R3Q5H9R7 873 aaPredicted RBP14.91□□□□□ -0.02
SDC2-201ENST00000302190 KCNT1Q5JUK3 1230 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 NOP9Q86U38 636 aaKnown RBP14.91□□□□□ -0.02
SDC2-201ENST00000302190 SLC17A8Q8NDX2 589 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 MAML1Q92585 1016 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 CFAP36Q96G28 342 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 NGRNQ9NPE2 291 aaKnown RBP14.91□□□□□ -0.02
SDC2-201ENST00000302190 CHST7Q9NS84 486 aa14.91□□□□□ -0.02
SDC2-201ENST00000302190 RBAKQ9NYW8 714 aaPredicted RBP14.91□□□□□ -0.02
SDC2-201ENST00000302190 IGF2BP3O00425 579 aaKnown RBP eCLIP14.9□□□□□ -0.023e-6■■■■□ 24.7
SDC2-201ENST00000302190 DDNO94850 711 aaPredicted RBP14.9□□□□□ -0.02
SDC2-201ENST00000302190 INHBAP08476 426 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 SKOR1P84550 965 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 OVGP1Q12889 678 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 RBBP5Q15291 538 aaKnown RBP14.9□□□□□ -0.02
SDC2-201ENST00000302190 AGBL2Q5U5Z8 902 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 SPATA21Q7Z572 469 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 CCDC33Q8N5R6 958 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 RUBCNQ92622 972 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 TARS2Q9BW92 718 aaKnown RBP14.9□□□□□ -0.02
SDC2-201ENST00000302190 APOL6Q9BWW8 343 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 VCPKMTQ9H867 229 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 G3BP2Q9UN86 482 aaKnown RBP14.9□□□□□ -0.02
SDC2-201ENST00000302190 ARHGAP42A6NI28 874 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 TXNDC9O14530 226 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 YBX3P16989 372 aaKnown RBP eCLIP14.9□□□□□ -0.02
SDC2-201ENST00000302190 PSMA2P25787 234 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 KRT81Q14533 505 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 MDH1BQ5I0G3 518 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 CFAP61Q8NHU2 1237 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 ERP27Q96DN0 273 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 CFAP57Q96MR6 1250 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 SH3GL2Q99962 352 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 OSBPL8Q9BZF1 889 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 ZNF541Q9H0D2 1346 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 CCDC195A0A1B0GUA6 201 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 DKC1O60832 514 aaKnown RBP eCLIP14.9□□□□□ -0.02
SDC2-201ENST00000302190 GMPSP49915 693 aaPredicted RBP14.9□□□□□ -0.02
SDC2-201ENST00000302190 CIAPIN1Q6FI81 312 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 SESTD1Q86VW0 696 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 ERICH1Q86X53 443 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 KCTD6Q8NC69 237 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 ETNPPLQ8TBG4 499 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 CYTH2Q99418 400 aa14.9□□□□□ -0.02
SDC2-201ENST00000302190 DIS3Q9Y2L1 958 aaKnown RBP14.9□□□□□ -0.02
SDC2-201ENST00000302190 CFAP69A5D8W1 941 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 GRAP2O75791 330 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 AGTP01019 485 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 HMGCS2P54868 508 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 JAG1P78504 1218 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 CYP4A22Q5TCH4 519 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 SV2AQ7L0J3 742 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 FAM163AQ96GL9 167 aaPredicted RBP14.89□□□□□ -0.03
SDC2-201ENST00000302190 FAXDC2Q96IV6 333 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 SEPT10Q9P0V9 454 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 MCM8Q9UJA3 840 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 AGO2Q9UKV8 859 aaKnown RBP14.89□□□□□ -0.03
SDC2-201ENST00000302190 SH3BP1Q9Y3L3 701 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 USP15Q9Y4E8 981 aaPredicted RBP14.89□□□□□ -0.03
SDC2-201ENST00000302190 MAN1A1P33908 653 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 ZNF662Q6ZS27 426 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 APBB1IPQ7Z5R6 666 aaPredicted RBP14.89□□□□□ -0.03
SDC2-201ENST00000302190 MICALL2Q8IY33 904 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 PPFIBP2Q8ND30 876 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 IL31RAQ8NI17 732 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 SCFD2Q8WU76 684 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 SPDL1Q96EA4 605 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 ZDHHC15Q96MV8 337 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 MCEEQ96PE7 176 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 LRRC37BQ96QE4 947 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 SH3GL3Q99963 347 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 ABCF3Q9NUQ8 709 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 DNAH12Q6ZR08 3092 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 EIF3DO15371 548 aaKnown RBP eCLIP14.89□□□□□ -0.03
SDC2-201ENST00000302190 TRAPPC3O43617 180 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 ASTE1Q2TB18 679 aaPredicted RBP14.89□□□□□ -0.03
SDC2-201ENST00000302190 DARS2Q6PI48 645 aaKnown RBP14.89□□□□□ -0.03
SDC2-201ENST00000302190 C1orf186Q6ZWK4 172 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 P3H4Q92791 437 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 MKNK1Q9BUB5 465 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 SLC13A1Q9BZW2 595 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 OLFML3Q9NRN5 406 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 PCDHA10Q9Y5I2 948 aa14.89□□□□□ -0.03
SDC2-201ENST00000302190 GAKO14976 1311 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms