RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ZC3H12AQ5D1E8 599 aaKnown RBP11.57□□□□□ -0.56
ZNF558-201ENST00000301475 SLC30A10Q6XR72 485 aa11.57□□□□□ -0.56
ZNF558-201ENST00000301475 ERMNQ8TAM6 284 aa11.57□□□□□ -0.56
ZNF558-201ENST00000301475 WDR60Q8WVS4 1066 aa11.57□□□□□ -0.56
ZNF558-201ENST00000301475 CRYGNQ8WXF5 182 aa11.57□□□□□ -0.56
ZNF558-201ENST00000301475 SLC5A5Q92911 643 aa11.57□□□□□ -0.56
ZNF558-201ENST00000301475 ZNF653Q96CK0 615 aa11.57□□□□□ -0.56
ZNF558-201ENST00000301475 TRABDQ9H4I3 376 aa11.57□□□□□ -0.56
ZNF558-201ENST00000301475 DMAC2Q9NW81 257 aa11.57□□□□□ -0.56
ZNF558-201ENST00000301475 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
ZNF558-201ENST00000301475 NEU2Q9Y3R4 380 aa11.57□□□□□ -0.56
ZNF558-201ENST00000301475 FAM86B1E9PN63 330 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 C2CD2LO14523 706 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 FAM86B2P0C5J1 330 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 RHBDL3P58872 404 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 ARHGAP4P98171 946 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 DPP8Q6V1X1 898 aaPredicted RBP11.56□□□□□ -0.56
ZNF558-201ENST00000301475 MYCT1Q8N699 235 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 SPIRE2Q8WWL2 714 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 AZIN2Q96A70 460 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 BICD1Q96G01 975 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 PRR11Q96HE9 360 aaPredicted RBP11.56□□□□□ -0.56
ZNF558-201ENST00000301475 RBM41Q96IZ5 413 aaKnown RBP11.56□□□□□ -0.56
ZNF558-201ENST00000301475 NAP1L4Q99733 375 aaKnown RBP11.56□□□□□ -0.56
ZNF558-201ENST00000301475 DCLK3Q9C098 648 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 KRT82Q9NSB4 513 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 LRRC4BQ9NT99 713 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 ARL8BQ9NVJ2 186 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 TRPC5Q9UL62 973 aaPredicted RBP11.56□□□□□ -0.56
ZNF558-201ENST00000301475 IGKV6D-41A0A0C4DH26 115 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 EXOC1LA0A1B0GW35 172 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 EML1O00423 815 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 ZBTB39O15060 712 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 EXOC3O60645 756 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 FAM13AO94988 1023 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 CYP1A2P05177 515 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 BCRP11274 1271 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 SPDYAQ5MJ70 313 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 TBC1D9BQ66K14 1250 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 MAIP1Q8WWC4 291 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 DDX50Q9BQ39 737 aaKnown RBP11.56□□□□□ -0.56
ZNF558-201ENST00000301475 WASF2Q9Y6W5 498 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 MYH11P35749 1972 aa11.56□□□□□ -0.56
ZNF558-201ENST00000301475 GSTTP1A0A1W2PQM5 241 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 GAS8O95995 478 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 CYP1A1P04798 512 aaPredicted RBP11.55□□□□□ -0.56
ZNF558-201ENST00000301475 UBTFL6P0CB48 400 aaPredicted RBP11.55□□□□□ -0.56
ZNF558-201ENST00000301475 NEK3P51956 506 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 RBM5P52756 815 aaKnown RBP eCLIP11.55□□□□□ -0.56
ZNF558-201ENST00000301475 SLC15A2Q16348 729 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 ATL2Q8NHH9 583 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 SAR1AQ9NR31 198 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 LMCD1Q9NZU5 365 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 DCTN4Q9UJW0 460 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 VAV3Q9UKW4 847 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 FRMD4BQ9Y2L6 1034 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
ZNF558-201ENST00000301475 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.55□□□□□ -0.56
ZNF558-201ENST00000301475 EMSYQ7Z589 1322 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 MEIS2O14770 477 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 PSMG1O95456 288 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 RFX1P22670 979 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 CA4P22748 312 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 MAGEA4P43358 317 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 RANBP1P43487 201 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 FMO1Q01740 532 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 CAV1Q03135 178 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 SLC34A1Q06495 639 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 PPP3CAQ08209 521 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 FASTKD3Q14CZ7 662 aaKnown RBP11.55□□□□□ -0.56
ZNF558-201ENST00000301475 QRICH1Q2TAL8 776 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 IZUMO3Q5VZ72 239 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 HS2ST1Q7LGA3 356 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 SLC47A2Q86VL8 602 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 RIBC1Q8N443 379 aaPredicted RBP11.55□□□□□ -0.56
ZNF558-201ENST00000301475 RFWD2Q8NHY2 731 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 PTCD3Q96EY7 689 aaKnown RBP11.55□□□□□ -0.56
ZNF558-201ENST00000301475 RBM15Q96T37 977 aaKnown RBP eCLIP11.55□□□□□ -0.56
ZNF558-201ENST00000301475 CCDC77Q9BR77 488 aa11.55□□□□□ -0.56
ZNF558-201ENST00000301475 MAGEA13PA6NCF6 341 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 POC1B-GALNT4F8VUJ3 575 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 GSC2O15499 205 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 LDHCP07864 332 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 ABHD2P08910 425 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 GAP43P17677 238 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 GSTT1P30711 240 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 OVGP1Q12889 678 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 MAPK6Q16659 721 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 DAB2IPQ5VWQ8 1189 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 SYDE1Q6ZW31 735 aaPredicted RBP11.54□□□□□ -0.56
ZNF558-201ENST00000301475 RELL1Q8IUW5 271 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 CYP2W1Q8TAV3 490 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 ZNF75CPQ92670 426 aaPredicted RBP11.54□□□□□ -0.56
ZNF558-201ENST00000301475 PTPRN2Q92932 1015 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 EIF2AK1Q9BQI3 630 aaKnown RBP11.54□□□□□ -0.56
ZNF558-201ENST00000301475 GTF3C4Q9UKN8 822 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 ATRNL1Q5VV63 1379 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 A0A1W2PPM1 405 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 TISP43B9A030 160 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 CYP26A1O43174 497 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms