RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ATG4CQ96DT6 458 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 ZBTB45Q96K62 511 aaPredicted RBP14.08□□□□□ -0.16
CASC4-201ENST00000299957 GJD4Q96KN9 370 aaPredicted RBP14.08□□□□□ -0.16
CASC4-201ENST00000299957 WDR18Q9BV38 432 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 ATP6V0A4Q9HBG4 840 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 PIH1D1Q9NWS0 290 aaKnown RBP14.08□□□□□ -0.16
CASC4-201ENST00000299957 TRPA1O75762 1119 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 ENO1P06733 434 aaKnown RBP14.08□□□□□ -0.16
CASC4-201ENST00000299957 NPTX2P47972 431 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 CDH6P55285 790 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 DRP2Q13474 957 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 RC3H1Q5TC82 1133 aaKnown RBP14.08□□□□□ -0.16
CASC4-201ENST00000299957 IL31Q6EBC2 164 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 PCGF5Q86SE9 256 aa14.08□□□□□ -0.16
CASC4-201ENST00000299957 TRPC5Q9UL62 973 aaPredicted RBP14.08□□□□□ -0.16
CASC4-201ENST00000299957 FNDC3AQ9Y2H6 1198 aaKnown RBP14.08□□□□□ -0.16
CASC4-201ENST00000299957 MRPL42Q9Y6G3 142 aaKnown RBP14.08□□□□□ -0.16
CASC4-201ENST00000299957 FAM47DPA6NHR8 397 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 PRPSAP2O60256 369 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 HAUS5O94927 633 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 NR3C2P08235 984 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 SMARCA1P28370 1054 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 ARFIP2P53365 341 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 ARL4CP56559 192 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 FAM102AQ5T9C2 384 aaPredicted RBP14.07□□□□□ -0.16
CASC4-201ENST00000299957 HHIPL2Q6UWX4 724 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 DNAAF3Q8N9W5 541 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 SCYL1Q96KG9 808 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 DNAJC18Q9H819 358 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 KIF9Q9HAQ2 790 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 SLCO1B3Q9NPD5 702 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 NRBP2Q9NSY0 501 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 TBC1D22BQ9NU19 505 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 NAALADL1Q9UQQ1 740 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 MYH8P13535 1937 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 PFASO15067 1338 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 ANKRD63C9JTQ0 380 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 RIPK2O43353 540 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 LPXNO60711 386 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 CBX6O95503 412 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 CCND2P30279 289 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 NCOA4Q13772 614 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 CAPRIN2Q6IMN6 1127 aaKnown RBP14.07□□□□□ -0.16
CASC4-201ENST00000299957 MIS18BP1Q6P0N0 1132 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 TRIM50Q86XT4 487 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 FAM71DQ8N9W8 422 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 MCUQ8NE86 351 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 ZKSCAN4Q969J2 545 aaPredicted RBP14.07□□□□□ -0.16
CASC4-201ENST00000299957 TRIM11Q96F44 468 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 SH3GL2Q99962 352 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 POLR3CQ9BUI4 534 aaPredicted RBP14.07□□□□□ -0.16
CASC4-201ENST00000299957 LRRC4BQ9NT99 713 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 HESX1Q9UBX0 185 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 UBE4BO95155 1302 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 LOC100653049A0A140TA62 436 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 DNM1LO00429 736 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 KRT34O76011 436 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 CHKAP35790 457 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 GRAMD1BQ3KR37 738 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 CEP128Q6ZU80 1094 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 ARHGAP24Q8N264 748 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 IL31RAQ8NI17 732 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 CNTNAP4Q9C0A0 1308 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 STAMBPO95630 424 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 RARGP13631 454 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 ITIH2P19823 946 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 RNASELQ05823 741 aaKnown RBP14.07□□□□□ -0.16
CASC4-201ENST00000299957 ZNF568Q3ZCX4 644 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 STRIP1Q5VSL9 837 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 GBP7Q8N8V2 638 aaPredicted RBP14.07□□□□□ -0.16
CASC4-201ENST00000299957 CRAMP1Q96RY5 1269 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 ADPGKQ9BRR6 497 aa14.07□□□□□ -0.16
CASC4-201ENST00000299957 C12orf65Q9H3J6 166 aaKnown RBP14.07□□□□□ -0.16
CASC4-201ENST00000299957 CAPN9O14815 690 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 PAX7P23759 505 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 ALDH18A1P54886 795 aaKnown RBP14.06□□□□□ -0.16
CASC4-201ENST00000299957 SAMD7Q7Z3H4 446 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 UBA3Q8TBC4 463 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 PIP4K2CQ8TBX8 421 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 VTI1AQ96AJ9 217 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 RAB6BQ9NRW1 208 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 GTF3C4Q9UKN8 822 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 TBX20Q9UMR3 447 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 M0QYV0 167 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 KIAA0391O15091 583 aaKnown RBP14.06□□□□□ -0.16
CASC4-201ENST00000299957 SSTR1P30872 391 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 SESN2P58004 480 aaPredicted RBP14.06□□□□□ -0.16
CASC4-201ENST00000299957 ZNF667Q5HYK9 610 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 GPAT2Q6NUI2 795 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 CDAN1Q8IWY9 1227 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 PPP4R1Q8TF05 950 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 VPS11Q9H270 941 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 A8MUI8 341 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 KRT3P12035 628 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 RARRES1P49788 294 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 NLRP11P59045 1033 aaKnown RBP14.06□□□□□ -0.16
CASC4-201ENST00000299957 PRKCEQ02156 737 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 TNFAIP1Q13829 316 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 RAPH1Q70E73 1250 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 SMC1BQ8NDV3 1235 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms