RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 PSMC3IPQ9P2W1 217 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 ARHGEF40Q8TER5 1519 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 WFS1O76024 890 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 TCF4P15884 667 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 PLCG1P19174 1290 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 PHKA1P46020 1223 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 KBTBD8Q8NFY9 601 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 MAGEB18Q96M61 343 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 TBCCD1Q9NVR7 557 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 TBK1Q9UHD2 729 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 SLC12A6Q9UHW9 1150 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 IRAK3Q9Y616 596 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 LMO7Q8WWI1 1683 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 ABCB11O95342 1321 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 ABCC1P33527 1531 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 PBRM1Q86U86 1689 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 BTN3A3O00478 584 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 PRMT3O60678 531 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 NOS1APO75052 506 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 XRCC4Q13426 336 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 ANGPTL8Q6UXH0 198 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 RASGRP2Q7LDG7 609 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 CCNJLQ8IV13 435 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 POMGNT1Q8WZA1 660 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 NECTIN2Q92692 538 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 VCPIP1Q96JH7 1222 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 SMYD3Q9H7B4 428 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 EFCAB1Q9HAE3 211 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 SPATA2Q9UM82 520 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 HIVEP3Q5T1R4 2406 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 PSMD3O43242 534 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 MAGEA10P43363 369 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 EXOSC10Q01780 885 aaKnown RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 RWDD4Q6NW29 188 aaKnown RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 FKBP9P1Q75LS8 142 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 LINS1Q8NG48 757 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 ZFAND2BQ8WV99 257 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 HESX1Q9UBX0 185 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 NCKAP5O14513 1909 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 IRGMA1A4Y4 181 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 MDM4O15151 490 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 PJA2O43164 708 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 ATF3P18847 181 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 GSTT1P30711 240 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 PEG10Q86TG7 708 aaKnown RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 KIAA1586Q9HCI6 787 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 MLXQ9UH92 298 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 FRMPD1Q5SYB0 1578 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 GDF11O95390 407 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 RORAP35398 523 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 YAP1P46937 504 aaKnown RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 MOSPD2Q8NHP6 518 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 EZH1Q92800 747 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 NLRP2Q9NX02 1062 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 GLS2Q9UI32 602 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 PARP3Q9Y6F1 533 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 ANKRD26Q9UPS8 1709 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 ZMYM6O95789 1325 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 MAPKBP1O60336 1514 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 LDOC1O95751 146 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 GPTP24298 496 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 FGD2Q7Z6J4 655 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 CHERPQ8IWX8 916 aaKnown RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 ANTXR1Q9H6X2 564 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 DMTF1Q9Y222 760 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 SMNDC1O75940 238 aaKnown RBP eCLIP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 MAPK4P31152 587 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 CDC73Q6P1J9 531 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 KRT28Q7Z3Y7 464 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 RNF135Q8IUD6 432 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 SPERTQ8NA61 448 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 UBXN6Q9BZV1 441 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 MUC13Q9H3R2 512 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 GPAMQ9HCL2 828 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 FANCLQ9NW38 375 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 ATP8B3O60423 1300 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 CES2O00748 559 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 AKAP8O43823 692 aaKnown RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 NOL4O94818 638 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 CIITAP33076 1130 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 TFDP2Q14188 446 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 TAGAPQ8N103 731 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 RNF26Q9BY78 433 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 RCOR1Q9UKL0 485 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 NEDD4P46934 1319 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 CNOT1A5YKK6 2376 aaKnown RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 SETD1AO15047 1707 aaKnown RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 WWP2O00308 870 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 COBLO75128 1261 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 KRT19P08727 400 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 CA8P35219 290 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 KCNT1Q5JUK3 1230 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 ITPRIPL1Q6GPH6 555 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 LRRC74BQ6ZQY2 392 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 TRIM67Q6ZTA4 783 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 SYN2Q92777 582 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-201ENST00000297405 COX4I2Q96KJ9 171 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 XKR8Q9H6D3 395 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 ANKHQ9HCJ1 492 aa5.07□□□□□ -1.6
CSMD3-201ENST00000297405 ABCA10Q8WWZ4 1543 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms