RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 C7orf31Q8N865 590 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 LRRC57Q8N9N7 239 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 RBBP8NLQ8NC74 664 aaPredicted RBP9.93□□□□□ -0.82
PRDM9-201ENST00000296682 FBXO25Q8TCJ0 367 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 ZNF516Q92618 1163 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 CPB2Q96IY4 423 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 PWWP2AQ96N64 755 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 MPHOSPH6Q99547 160 aaKnown RBP9.93□□□□□ -0.82
PRDM9-201ENST00000296682 SPON1Q9HCB6 807 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 MAP3K20Q9NYL2 800 aaKnown RBP9.93□□□□□ -0.82
PRDM9-201ENST00000296682 TMEM59LQ9UK28 342 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 SNCAIPQ9Y6H5 919 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 SOWAHBA6NEL2 793 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 GOLGA8MH3BSY2 632 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 MAFGO15525 162 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 GRAP2O75791 330 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 PRKCBP05771 671 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 FDX1P10109 184 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 GTF2H1P32780 548 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 SCYL2Q6P3W7 929 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 GPR88Q9GZN0 384 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 RAB17Q9H0T7 212 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 C10orf88Q9H8K7 445 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 AGTPBP1Q9UPW5 1226 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 ZNF148Q9UQR1 794 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.93□□□□□ -0.82
PRDM9-201ENST00000296682 SPATA31C2B4DYI2 1134 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 ARIH2O95376 493 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 MAP3K6O95382 1288 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 ATP4AP20648 1035 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 HSD17B3P37058 310 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 TDRD10Q5VZ19 366 aaKnown RBP9.93□□□□□ -0.82
PRDM9-201ENST00000296682 SLC9A9Q8IVB4 645 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 ANKRD42Q8N9B4 389 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 PLVAPQ9BX97 442 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 PORCNQ9H237 461 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 OTOFQ9HC10 1997 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 LRRD1A4D1F6 860 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 O00370 1275 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 EBAG9O00559 213 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 EXTL3O43909 919 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 MAGOHP61326 146 aaKnown RBP9.92□□□□□ -0.82
PRDM9-201ENST00000296682 CDR2Q01850 454 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 GLE1Q53GS7 698 aaKnown RBP9.92□□□□□ -0.82
PRDM9-201ENST00000296682 KCNT1Q5JUK3 1230 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 C1orf131Q8NDD1 294 aaKnown RBP9.92□□□□□ -0.82
PRDM9-201ENST00000296682 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.92□□□□□ -0.82
PRDM9-201ENST00000296682 LMO3Q8TAP4 145 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 MDM1Q8TC05 714 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 MTRF1LQ9UGC7 380 aaKnown RBP9.92□□□□□ -0.82
PRDM9-201ENST00000296682 KIAA1217Q5T5P2 1943 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 SYNJ2BP-COX16A0A087WUM0 186 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 CHRNB2P17787 502 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 NR1D1P20393 614 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 CETN2P41208 172 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 NCKAP1LP55160 1127 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 CAPSQ13938 189 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 DENND2CQ68D51 928 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 JAMLQ86YT9 394 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 FMNL3Q8IVF7 1028 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 CDCA5Q96FF9 252 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 ST6GALNAC4Q9H4F1 302 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 COX16Q9P0S2 106 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 NUB1Q9Y5A7 615 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 CEP350Q5VT06 3117 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 CCDC188H7C350 402 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 LYPLA2O95372 231 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 CXCL8P10145 99 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 LAMTOR4Q0VGL1 99 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 AMHR2Q16671 573 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 ZNF699Q32M78 642 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 GLRA4Q5JXX5 417 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 SLFN11Q7Z7L1 901 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 C12orf56Q8IXR9 622 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 ANKRD13AQ8IZ07 590 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 HELQQ8TDG4 1101 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 ADARB2Q9NS39 739 aaKnown RBP9.92□□□□□ -0.82
PRDM9-201ENST00000296682 PNMA2Q9UL42 364 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 CEP83Q9Y592 693 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 PTPRJQ12913 1337 aa9.92□□□□□ -0.82
PRDM9-201ENST00000296682 MAPK13O15264 365 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 TNNC2P02585 160 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 TTMPQ5BVD1 217 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 PRAMEF19Q5SWL8 479 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 SLFN12LQ6IEE8 588 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 CPLX4Q7Z7G2 160 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 FAM71AQ8IYT1 594 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 MICALL1Q8N3F8 863 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 CCDC33Q8N5R6 958 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 EMC1Q8N766 993 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 CHST13Q8NET6 341 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 ATP8B4Q8TF62 1192 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 A0A087WZ62 844 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 FOXO6A8MYZ6 492 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 GOLGA8KD6RF30 607 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 PIAS1O75925 651 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 KIAA0754O94854 1291 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 OSBPP22059 807 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 LIG3P49916 1009 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 IRAK1P51617 712 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms