RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 TMTC3Q6ZXV5 915 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 PLPPR4Q7Z2D5 763 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 ATG4DQ86TL0 474 aaPredicted RBP11.01□□□□□ -0.65
LRTM1-201ENST00000273286 SGMS1Q86VZ5 419 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 FANCBQ8NB91 859 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 P2RX5Q93086 422 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 DUSP9Q99956 384 aaKnown RBP11.01□□□□□ -0.65
LRTM1-201ENST00000273286 SDF4Q9BRK5 362 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 MYL10Q9BUA6 226 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 UPF3BQ9BZI7 483 aaKnown RBP11.01□□□□□ -0.65
LRTM1-201ENST00000273286 WNT10AQ9GZT5 417 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 RNF19AQ9NV58 838 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 SLC9A2Q9UBY0 812 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 PCDHA6Q9UN73 950 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 PCDHA8Q9Y5H6 950 aa11.01□□□□□ -0.65
LRTM1-201ENST00000273286 NFASCO94856 1347 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 GSTTP1A0A1W2PQM5 241 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 ATP9AO75110 1047 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 STAG3L1P0CL83 205 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 ETF1P62495 437 aaKnown RBP11□□□□□ -0.65
LRTM1-201ENST00000273286 MRPS6P82932 125 aaKnown RBP11□□□□□ -0.65
LRTM1-201ENST00000273286 IKZF1Q13422 519 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 BTG3Q14201 252 aaPredicted RBP11□□□□□ -0.65
LRTM1-201ENST00000273286 LPIN1Q14693 890 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 TCEAL5Q5H9L2 206 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 ODR4Q5SWX8 454 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 HEATR3Q7Z4Q2 680 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 NME8Q8N427 588 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 ASB11Q8WXH4 323 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 ZNF689Q96CS4 500 aaPredicted RBP11□□□□□ -0.65
LRTM1-201ENST00000273286 KCNH7Q9NS40 1196 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 MAPK8IP1Q9UQF2 711 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 SUPT16HQ9Y5B9 1047 aaKnown RBP11□□□□□ -0.65
LRTM1-201ENST00000273286 AK5Q9Y6K8 562 aa11□□□□□ -0.65
LRTM1-201ENST00000273286 DOCK5Q9H7D0 1870 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 PIEZO1Q92508 2521 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 TTC3P53804 2025 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 FSD2A1L4K1 749 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 ANKRD33BA6NCL7 494 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 ENPP3O14638 875 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 SLC27A2O14975 620 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 DGKIO75912 1065 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 SLITRK5O94991 958 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 MMP1P03956 469 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 IL9P15248 144 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 MARK3P27448 753 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 RCAN1P53805 252 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 FGD1P98174 961 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 MARCH8Q5T0T0 291 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 MCTP2Q6DN12 878 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 NPAS4Q8IUM7 802 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 CMTR2Q8IYT2 770 aaKnown RBP10.99□□□□□ -0.65
LRTM1-201ENST00000273286 DNAJB3Q8WWF6 145 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 MIPEPQ99797 713 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 MXRA8Q9BRK3 442 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 FOXQ1Q9C009 403 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 LSG1Q9H089 658 aaKnown RBP10.99□□□□□ -0.65
LRTM1-201ENST00000273286 KCNH6Q9H252 994 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 CLDND1Q9NY35 253 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 CDY2AQ9Y6F7 541 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 KDM3AQ9Y4C1 1321 aa10.99□□□□□ -0.65
LRTM1-201ENST00000273286 SMIM35A0A1B0GVV1 85 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 H3BQ06 376 aaPredicted RBP10.98□□□□□ -0.65
LRTM1-201ENST00000273286 INSRRP14616 1297 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 STAT5BP51692 787 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 NAPAP54920 295 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 SEPT6Q14141 434 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 SLBPQ14493 270 aaKnown RBP eCLIP10.98□□□□□ -0.65
LRTM1-201ENST00000273286 NECTIN1Q15223 517 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 NKG7Q16617 165 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 CEP55Q53EZ4 464 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 CREB3L3Q68CJ9 461 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 SLC23A3Q6PIS1 610 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 APOA5Q6Q788 366 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 RUFY4Q6ZNE9 571 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 EP400NLQ6ZTU2 488 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 SND1Q7KZF4 910 aaKnown RBP eCLIP10.98□□□□□ -0.65
LRTM1-201ENST00000273286 NIPA1Q7RTP0 329 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 MICU3Q86XE3 530 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 ADHFE1Q8IWW8 467 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 POU5F2Q8N7G0 328 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 CD320Q9NPF0 282 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 RIC8AQ9NPQ8 531 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 PRDM7Q9NQW5 492 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 RAPGEFL1Q9UHV5 662 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 TPX2Q9ULW0 747 aaKnown RBP10.98□□□□□ -0.65
LRTM1-201ENST00000273286 PCDHA2Q9Y5H9 948 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 TRPV2Q9Y5S1 764 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 IGSF9BQ9UPX0 1349 aa10.98□□□□□ -0.65
LRTM1-201ENST00000273286 DCXO43602 365 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 HMGB1P09429 215 aaKnown RBP10.97□□□□□ -0.65
LRTM1-201ENST00000273286 LINC00271P0C7V0 271 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 RXRAP19793 462 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 CLCN7P51798 805 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 ADCY7P51828 1080 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 ACTR2P61160 394 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 RPS26P62854 115 aaKnown RBP10.97□□□□□ -0.65
LRTM1-201ENST00000273286 IGBP1P78318 339 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 PAK2Q13177 524 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 KRT32Q14532 448 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms