RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 PLA2G4FQ68DD2 849 aa29.23■■■□□ 2.27
CBX4-201ENST00000269397 VSIG1Q86XK7 387 aa29.23■■■□□ 2.27
CBX4-201ENST00000269397 MCOLN2Q8IZK6 566 aa29.23■■■□□ 2.27
CBX4-201ENST00000269397 FAM167BQ9BTA0 163 aa29.23■■■□□ 2.27
CBX4-201ENST00000269397 CD58P19256 250 aa29.23■■■□□ 2.27
CBX4-201ENST00000269397 MKRN3Q13064 507 aaKnown RBP29.23■■■□□ 2.27
CBX4-201ENST00000269397 GSTA5Q7RTV2 222 aa29.23■■■□□ 2.27
CBX4-201ENST00000269397 FBXL13Q8NEE6 735 aa29.23■■■□□ 2.27
CBX4-201ENST00000269397 RBM15Q96T37 977 aaKnown RBP eCLIP29.23■■■□□ 2.274e-7■■■■□ 24.3
CBX4-201ENST00000269397 EHMT1Q9H9B1 1298 aa29.23■■■□□ 2.27
CBX4-201ENST00000269397 HAO1Q9UJM8 370 aa29.23■■■□□ 2.27
CBX4-201ENST00000269397 USTQ9Y2C2 406 aa29.23■■■□□ 2.27
CBX4-201ENST00000269397 POC1B-GALNT4F8VUJ3 575 aa29.22■■■□□ 2.27
CBX4-201ENST00000269397 FBF1Q8TES7 1133 aa29.22■■■□□ 2.27
CBX4-201ENST00000269397 SPDL1Q96EA4 605 aa29.22■■■□□ 2.27
CBX4-201ENST00000269397 RIT2Q99578 217 aa29.22■■■□□ 2.27
CBX4-201ENST00000269397 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.22■■■□□ 2.277e-7■□□□□ 11.3
CBX4-201ENST00000269397 MRPL11Q9Y3B7 192 aaKnown RBP29.22■■■□□ 2.27
CBX4-201ENST00000269397 FAM47DPA6NHR8 397 aa29.22■■■□□ 2.27
CBX4-201ENST00000269397 TCEA3O75764 348 aa29.22■■■□□ 2.27
CBX4-201ENST00000269397 IL9RQ01113 521 aa29.22■■■□□ 2.27
CBX4-201ENST00000269397 LDHDQ86WU2 507 aa29.22■■■□□ 2.27
CBX4-201ENST00000269397 GLIS1Q8NBF1 620 aa29.22■■■□□ 2.27
CBX4-201ENST00000269397 COL20A1Q9P218 1284 aa29.22■■■□□ 2.27
CBX4-201ENST00000269397 CNGA1P29973 690 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 YWHABP31946 246 aaKnown RBP29.21■■■□□ 2.27
CBX4-201ENST00000269397 SOX10P56693 466 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 ALCAMQ13740 583 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 P3H1Q32P28 736 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 DACT2Q5SW24 774 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 PPP1R21Q6ZMI0 780 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 SYDE1Q6ZW31 735 aaPredicted RBP29.21■■■□□ 2.27
CBX4-201ENST00000269397 SV2AQ7L0J3 742 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 NEU2Q9Y3R4 380 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 MAGEA4P43358 317 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 GPC3P51654 580 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 TAS2R40P59535 323 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 CAV1Q03135 178 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 LMBRD2Q68DH5 695 aaPredicted RBP29.21■■■□□ 2.27
CBX4-201ENST00000269397 PODNQ7Z5L7 613 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 PASD1Q8IV76 773 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 C4orf33Q8N1A6 199 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 MICAL1Q8TDZ2 1067 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 AGBL1Q96MI9 1066 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 CCDC77Q9BR77 488 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 TMEM8AQ9HCN3 771 aa29.21■■■□□ 2.27
CBX4-201ENST00000269397 DHX15O43143 795 aaKnown RBP29.2■■■□□ 2.27
CBX4-201ENST00000269397 PRMT6Q96LA8 375 aaPredicted RBP29.2■■■□□ 2.27
CBX4-201ENST00000269397 PHTF1Q9UMS5 762 aa29.2■■■□□ 2.27
CBX4-201ENST00000269397 CHKBQ9Y259 395 aa29.2■■■□□ 2.27
CBX4-201ENST00000269397 SBDSQ9Y3A5 250 aaKnown RBP eCLIP29.2■■■□□ 2.27
CBX4-201ENST00000269397 EXOC1LA0A1B0GW35 172 aa29.2■■■□□ 2.26
CBX4-201ENST00000269397 ZSCAN5DPP0CG00 497 aa29.2■■■□□ 2.26
CBX4-201ENST00000269397 UNGP13051 313 aaPredicted RBP29.2■■■□□ 2.26
CBX4-201ENST00000269397 MAN1A1P33908 653 aa29.2■■■□□ 2.26
CBX4-201ENST00000269397 QARSP47897 775 aaKnown RBP29.2■■■□□ 2.26
CBX4-201ENST00000269397 ZNF449Q6P9G9 518 aa29.2■■■□□ 2.26
CBX4-201ENST00000269397 ANKRD35Q8N283 1001 aa29.2■■■□□ 2.26
CBX4-201ENST00000269397 POMGNT1Q8WZA1 660 aa29.2■■■□□ 2.26
CBX4-201ENST00000269397 MAML1Q92585 1016 aa29.2■■■□□ 2.26
CBX4-201ENST00000269397 RANBP17Q9H2T7 1088 aaKnown RBP29.2■■■□□ 2.26
CBX4-201ENST00000269397 SAYSD1Q9NPB0 183 aa29.2■■■□□ 2.26
CBX4-201ENST00000269397 GRID1Q9ULK0 1009 aa29.2■■■□□ 2.26
CBX4-201ENST00000269397 CCDC189A1A4V9 331 aa29.19■■■□□ 2.26
CBX4-201ENST00000269397 CFHP08603 1231 aa29.19■■■□□ 2.26
CBX4-201ENST00000269397 FDX1P10109 184 aa29.19■■■□□ 2.26
CBX4-201ENST00000269397 MAPTP10636 758 aaKnown RBP29.19■■■□□ 2.26
CBX4-201ENST00000269397 KLF1Q13351 362 aaPredicted RBP29.19■■■□□ 2.26
CBX4-201ENST00000269397 STAT4Q14765 748 aa29.19■■■□□ 2.26
CBX4-201ENST00000269397 FASTKD3Q14CZ7 662 aaKnown RBP29.19■■■□□ 2.26
CBX4-201ENST00000269397 EURLQ9NYK6 297 aa29.19■■■□□ 2.26
CBX4-201ENST00000269397 UPP2O95045 317 aa29.19■■■□□ 2.26
CBX4-201ENST00000269397 MIS18BP1Q6P0N0 1132 aa29.19■■■□□ 2.26
CBX4-201ENST00000269397 MAIP1Q8WWC4 291 aa29.19■■■□□ 2.26
CBX4-201ENST00000269397 TCP10L2B9ZVM9 353 aa29.18■■■□□ 2.26
CBX4-201ENST00000269397 GCAP28676 217 aa29.18■■■□□ 2.26
CBX4-201ENST00000269397 KAZNQ674X7 775 aa29.18■■■□□ 2.26
CBX4-201ENST00000269397 CCDC89Q8N998 374 aa29.18■■■□□ 2.26
CBX4-201ENST00000269397 FHDC1Q9C0D6 1143 aaPredicted RBP29.18■■■□□ 2.26
CBX4-201ENST00000269397 TBX20Q9UMR3 447 aa29.18■■■□□ 2.26
CBX4-201ENST00000269397 USP20Q9Y2K6 914 aa29.18■■■□□ 2.26
CBX4-201ENST00000269397 ATRNL1Q5VV63 1379 aa29.18■■■□□ 2.26
CBX4-201ENST00000269397 PI4K2BG5E9Z4 385 aa29.18■■■□□ 2.26
CBX4-201ENST00000269397 PKN2Q16513 984 aaKnown RBP29.18■■■□□ 2.26
CBX4-201ENST00000269397 TRIM68Q6AZZ1 485 aa29.18■■■□□ 2.26
CBX4-201ENST00000269397 TMX4Q9H1E5 349 aaPredicted RBP29.18■■■□□ 2.26
CBX4-201ENST00000269397 BATF3Q9NR55 127 aa29.18■■■□□ 2.26
CBX4-201ENST00000269397 ZMYND8Q9ULU4 1186 aaPredicted RBP29.18■■■□□ 2.26
CBX4-201ENST00000269397 COQ4Q9Y3A0 265 aa29.18■■■□□ 2.26
CBX4-201ENST00000269397 ASMTLO95671 621 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 CHRM1P11229 460 aaPredicted RBP29.17■■■□□ 2.26
CBX4-201ENST00000269397 ETS1P14921 441 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 POLGP54098 1239 aaPredicted RBP29.17■■■□□ 2.26
CBX4-201ENST00000269397 ACVR2BQ13705 512 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 ATP13A4Q4VNC1 1196 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 C11orf70Q9BRQ4 267 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 OSBPL8Q9BZF1 889 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 KIAA1683Q9H0B3 1180 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 TMX2Q9Y320 296 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 MAPK13O15264 365 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms