RNA–Protein interactions for RNA: ENST00000268613.14

CDH13-201, Transcript of cadherin 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CDH13, Length 2,722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-201ENST00000268613 SMNDC1O75940 238 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDH13-201ENST00000268613 CYP3A7P24462 503 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 THOP1P52888 689 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 SLC26A5P58743 744 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 FOXK2Q01167 660 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 DYNC1I2Q13409 638 aaKnown RBP8.12□□□□□ -1.11
CDH13-201ENST00000268613 PDE3AQ14432 1141 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 MEA1Q16626 185 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 MARCH10Q8NA82 808 aaPredicted RBP8.12□□□□□ -1.11
CDH13-201ENST00000268613 CCT6BQ92526 530 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 TNFRSF25Q93038 417 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 ZNF653Q96CK0 615 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 TMX3Q96JJ7 454 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 TSNARE1Q96NA8 513 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 SMC6Q96SB8 1091 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 FAM107BQ9H098 131 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 GBA3Q9H227 469 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 NEK6Q9HC98 313 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 MED16Q9Y2X0 877 aa8.12□□□□□ -1.11
CDH13-201ENST00000268613 CHTOPQ9Y3Y2 248 aaKnown RBP8.12□□□□□ -1.11
CDH13-201ENST00000268613 ERVV-2B6SEH9 535 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 PIK3CDO00329 1044 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 NIPSNAP2O75323 286 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 CLTBP09497 229 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 PABPC4LP0CB38 370 aaKnown RBP8.11□□□□□ -1.11
CDH13-201ENST00000268613 MTHFSP49914 203 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 ZNF280AP59817 542 aaPredicted RBP8.11□□□□□ -1.11
CDH13-201ENST00000268613 RNASELQ05823 741 aaKnown RBP8.11□□□□□ -1.11
CDH13-201ENST00000268613 ZSCAN25Q6NSZ9 544 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 CNNM4Q6P4Q7 775 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 TMC7Q7Z402 723 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 SRGAP1Q7Z6B7 1085 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 RGL4Q8IZJ4 473 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 REXO1Q8N1G1 1221 aaKnown RBP8.11□□□□□ -1.11
CDH13-201ENST00000268613 USHBP1Q8N6Y0 703 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 CPLX3Q8WVH0 158 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 MPHOSPH8Q99549 860 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 GAL3ST1Q99999 423 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 NTMT1Q9BV86 223 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 ACAT2Q9BWD1 397 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 SLC26A6Q9BXS9 759 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 CALN1Q9BXU9 219 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 EMILIN2Q9BXX0 1053 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 OCEL1Q9H607 264 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 GORASP2Q9H8Y8 452 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 MRM3Q9HC36 420 aaKnown RBP8.11□□□□□ -1.11
CDH13-201ENST00000268613 PFDN4Q9NQP4 134 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 TMCO1Q9UM00 188 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 TRIM33Q9UPN9 1127 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 NOX1Q9Y5S8 564 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 RRN3P2A6NIE6 340 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 RRP8O43159 456 aaKnown RBP8.11□□□□□ -1.11
CDH13-201ENST00000268613 DKC1O60832 514 aaKnown RBP eCLIP8.11□□□□□ -1.11
CDH13-201ENST00000268613 FAM13AO94988 1023 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 TBX18O95935 607 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 JAK1P23458 1154 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 IFNAR2P48551 515 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 MTTPP55157 894 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 PPARDQ03181 441 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 BMPR2Q13873 1038 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 SGCAQ16586 387 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 KIAA0319Q5VV43 1072 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 TCERG1LQ5VWI1 586 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 PM20D1Q6GTS8 502 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 C6orf89Q6UWU4 347 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 NLRC3Q7RTR2 1065 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 STMN4Q9H169 189 aaPredicted RBP8.11□□□□□ -1.11
CDH13-201ENST00000268613 BHMT2Q9H2M3 363 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 IARS2Q9NSE4 1012 aaKnown RBP8.11□□□□□ -1.11
CDH13-201ENST00000268613 OLA1Q9NTK5 396 aaKnown RBP8.11□□□□□ -1.11
CDH13-201ENST00000268613 ASNSD1Q9NWL6 643 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 IL37Q9NZH6 218 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 ORC3Q9UBD5 711 aaPredicted RBP8.11□□□□□ -1.11
CDH13-201ENST00000268613 TJP1Q07157 1748 aa8.11□□□□□ -1.11
CDH13-201ENST00000268613 CCDC171Q6TFL3 1326 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 PRR5-ARHGAP8B1AHC4 643 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 IKBKBO14920 756 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 LRRN2O75325 713 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 PIGNO95427 931 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 CKBP12277 381 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 TRIM23P36406 574 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 PSMC4P43686 418 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 HNMTP50135 292 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 SMARCB1Q12824 385 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 IFRD2Q12894 506 aaPredicted RBP8.1□□□□□ -1.11
CDH13-201ENST00000268613 SCARB2Q14108 478 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 DOC2AQ14183 400 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 WDR43Q15061 677 aaKnown RBP eCLIP8.1□□□□□ -1.11
CDH13-201ENST00000268613 TLR1Q15399 786 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 SLC44A4Q53GD3 710 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 GRTP1Q5TC63 336 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 PCSK9Q8NBP7 692 aaKnown RBP8.1□□□□□ -1.11
CDH13-201ENST00000268613 FAM200AQ8TCP9 573 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 VPS39Q96JC1 886 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 ZC3H10Q96K80 434 aaKnown RBP8.1□□□□□ -1.11
CDH13-201ENST00000268613 PPP1R36Q96LQ0 422 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 TRIM55Q9BYV6 548 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 L2HGDHQ9H9P8 463 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 PRM3Q9NNZ6 103 aa8.1□□□□□ -1.11
CDH13-201ENST00000268613 SEMA3GQ9NS98 782 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms